Gene detail

Detail information of GWHGAAEX002090/evm.TU.scaffold_115.120

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG4287	Pectin acetylesterase and similar proteins
nr	gi\|695029132\|ref\|XP_009401969.1\|	PREDICTED: uncharacterized protein LOC103985840 isoform X2 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0SZM0\|M0SZM0_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P18410_001}
TAIR	AT1G57590	Pectinacetylesterase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000116	2491974	2502761	+

Transcript Sequence
>GWHTAAEX002090 GGAGGCTTCTTTTCTTGAAGAACCCTCCGTCGTCCAGACGTCCGGCCATGGCGCCTCAATGGAAAAGATTGCTGTCCTCTTTCTCTCTCAGACGCGTAAGGATTTTTTATGCCTGCCCAGTGCCCTCAAATGGGGGCATCAAAGCAAAAGCTGCTTGGGGTCTGTCTTCAATGTTCGAAGTCACGCGGAGTGGCTGAGACGTTTCCTTATTCTTGTCATTAATGCCCAATTCCTTCTCAATAAGGTAAAATTCCCCTTCGAAACCACTTCTGTTGCTCTTTCCATTTTTAATATAGTAATTATTCATCATCGATTCCGTCGCTAAGATTCTTCCTGTTTCCCTTTACATAAACCCATTTAGATTCTTATGCTGTCATTGCTGCACTGCTTTCTTAACTTAACCTAACAAATGAAGTATTTCTGGGCTAATGGTTCCCTTGTTTTGCTGCTCTCTGGATATGCTTTCTGCTTAGATTACTTGAATCTGACGGAGAAGGTTTTGGATGGTGGGTTGGATCTCGGCAGGCCTCCTCTTTTCGTCCCACTCACACTTATTCCTGCCGCCGCCGCCAGTGGAGCTTTTTGCTTGGATGGAAGCTTGCCTGGTTACCATTTTCACCGTGGATTCGGATCTGGGGCATATAGTTGGCTTGTTCAATTAGAGGGTGGCGGCTGGTGCAATAATATTGAAGCATGCCTTTACCGCAAGAAATCTCACCGTGGTTCATCGTATTTCATGGAGAAACGGCTACAATTTACTGGAATTTTGAGTGATAAAGTTGAAGAAAATCCAGATTTTTATAACTGGAACAGAGTTAAGGTTCGCTACTGTGATGGCGCCTCTTTCCTTGGTGAAGGCTATAACAAGGTTGCAGGCCTTTTTTTCCGTGGTCAGCGCATCTGGTTAGTTGCTATGGAGGATTTGATGTTGAAGGGAATGAGACATGCTAACCAGGCGCTTCTTACTGGCTGCTCTGCGGGTGGTTTAGCAGCCATACACCATTGTGATGGATTTCAAGCATTATTTCCAGGAAGCACAAGAGTCAAGTGCCTTGCAGATGCTGGAATGTTCCTTGATGCTATTGATGTGGCTGGTCGGCACACTTTAAGATCCTTTTTTGGAGGAGTAGTCAATTTACAGGGGGTGGCAAGGAACTTACCACGGATCTGTACCTCCCGCGTGCAACCGGTTTTGTGTTTTTTTCCACAGAATGTGGTGTCCATTATTCAGACCCCGCTTTTTCTCTTAAATACAGCATATGATGTATGGCAGCTTAAGGAGAGCCTGGCAACCGAAGCTGCTGATCCTCTTGGCTATTGGCAACCATGCAAAATGGATAATGCAAAATGCAACACAGAGCAAATTTGGTTTCTTCAAGGCTTCAGGAAGCAGATGCTTAAGATTGTGAAAAGGTTATTATTATCAAAAACAAATGGGGTATTTATTAATTCTTGTTTTGCCCATTGCCAAAGTGAGAGGCAGGATACTTGGTTCGGAAATGACTCCCCTGCTATTAGGAACAAGGGAATCGCGAATTCGGTCGGCGATTGGTACTTTGATCGTTCGCCGGTCAGAGAAACGGACTGTCCTTATCCATGCGACAAAACATGCCATCACCAAGTCAGCAGAAAGAGAAAGCCGCCTTTCGCGCTTTCCAATGTCTCTCTGCATGCTTAACCGAATTCTGCTTTTAAATTATTTGAAAATTGAAAGTATTAATATTTTTACCTTTAGAGTTATATGACCCATAAGCACGTAAAGCTTCCTTACATGTTTAACACACAAATGTTGTCTCTAATGGATATAATGTAAGTTAATCCTTACTGTTATTTGTCTTTCATTTTGAAGGGGATCCCAAAATAGGTAGTATATATACGTCTGTGTTCGTTGATTTGATTTGGCATTACACGATGGAAGGAATAGAAGAGATTAATAGACTTGGGGGGCTAATTAGATTTGGCTAGCTTACACTGTTGCTTTTGATGGCAACAAGAAGTTTGGATATTAGAGGCTTTATTATGTTCATTTACTAATAATAATGCAAAAGATTGAATAAACTAG

Network for GWHGAAEX002090

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module14

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03283.12	PAE	42	387	2.20E-152

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K19882	NOTUM	Wnt signaling pathway	map04310

Gene Ontology

GO term	Ontology	Name
GO:0016787	Molecular Function	hydrolase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.820
SRP064423	SRR2545915	Juvenile tuber	0.500
SRP108465	SRR5643513	five period of Gastrodia elata	1.100
	SRR5643514	five period of Gastrodia elata	1.190
	SRR5643515	five period of Gastrodia elata	0.820
	SRR5643524	five period of Gastrodia elata	1.200
	SRR5643525	five period of Gastrodia elata	1.490
	SRR5643528	five period of Gastrodia elata	0.920
	SRR5643658	five period of Gastrodia elata	1.530
	SRR5643659	five period of Gastrodia elata	0.530
	SRR5643660	five period of Gastrodia elata	0.980
	SRR5643661	five period of Gastrodia elata	0.790
	SRR5643662	five period of Gastrodia elata	0.610
	SRR5643663	five period of Gastrodia elata	0.670
	SRR5643664	five period of Gastrodia elata	0.980
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.130
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.640
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.930
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.710
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.070
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.670
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.770
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.570
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.670
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.970
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.850
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.850
SRP279888	Gastro	Gastrodia elata tuber	1.35
	Juven	Juvenile tuber	0.74
	Mother_Gastro	Mother tuber of Gastrodia elata	2.50
	Mother_Juven	Mother tuber of Juvenile	1.31