Gene detail

Database	Orthologs	E value	Annotation
COG	gi\|312136744\|ref\|YP_004004081.1\|	1.00E-75	proteasome-activating nucleotidase [Methanothermus fervidus DSM 2088]
KOG	KOG0651	0	26S proteasome regulatory complex, ATPase RPT4
nr	gi\|672138124\|ref\|XP_008792808.1\|	0	PREDICTED: 26S protease regulatory subunit S10B homolog B [Phoenix dactylifera]
Swissprot	tr\|Q9MAK9\|PS10B_ARATH	0	26S protease regulatory subunit S10B homolog B
trEMBL	tr\|A0A059BPB9\|A0A059BPB9_EUCGR	0	Uncharacterized protein {ECO:0000313\|EMBL:KCW67889.1}
TAIR	AT1G45000	0	AAA-type ATPase family protein

Scaffold	Start	End	Strand
GWHAAEX00000116	2512381	2529079	+

Transcript Sequence
>GWHTAAEX002091 ATGAATGAAGCGGAGGACCCTTCCCGTCGTCGGAGTGCCTTAAACGACTATCGTAAGAAGCTTCTTAATTACAAGGAGCAGGAAACCAGGGCTCGAACTGCCAGGGAGAGCCTAAGAAATGCAAAGAAAGAGTTTTCCAAGACAGAAGACGACTTAAAGTCTCTACAAAGTGTTGGCCAAATTATTGGAGAAGTTCTTCGGCCTCTTGATAATGAACGCTTGATAGTTAAGGCTAGTAGTGGTCCTAGATATGTTGTCGGTTGCAGAAGTAAAGTTGATAAAGATAAATTAACATCCGGAACACGTGTGGTTCTTGACATGACTACTTTAACAATAATGCGAGCTCTTCCTCGAGAGGTCGATCCTGTTGTTTACAACATGCTTCATGAAGATCCAGGTAATGTAAGTTATTCAGCTGTAGGAGGGTTGTCTGATCAGATTCGGGAACTTCGCGAGTCAATTGAATTACCATTGATGAATCCGGAGCTTTTCCTCAGAGTTGGGATTAAGCCTCCAAAGGGTGTCCTTCTTTATGGCCCTCCTGGGACTGGAAAAACCTTACTAGCAAGGGCTATTGCTAGTAACATAGATGCCAATTTCTTGAAGGCAAGTCTTGTTGTTTCCAGCGCCATTATTGACAAGTATATTGGTGAAAGCGCTAGATTAATTAGGGAGATGTTTGGCTATGCTAGAGATCACCAACCATGCATCATCTTCATGGATGAGATTGATGCCATCGGTGGTCGTCGTTTTAGCGAGGGAACTAGTGCTGATCGAGAGATTCAAAGAACTCTAATGGAGTTGCTCAATCAGCTGGATGGATTTGATCAGCTTGGAAAGACTGCAGAGCCTACCAGTGGCAACAAACGCCACATATTGAAGATATTAGTTGACTAAATTATATTCTGGATTTGATCCAGCTTGTGTAGACATTATTCAAATGAAACAAAATTTTTTGTCAAGTTGTGGGGCTTATTACGAACAGAAAGTGTTCAGATATAATTGATGCCTCTATTGGGCAGGTTGTAATTTTTTTGTATACAATTGGCCATTATCTGTGAAAACCATATCGGCATTTTAATTTCTAACGTTGTTAACTATATGTGCGGCTTTTTCATTGCATGTTAGAATATGGAGTTATAAAGAAATTG

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
K03064	PSMC6, RPT4	Proteasome	map03050

GO term	Ontology	Name
GO:0005524	Molecular Function	ATP binding

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	28.320
SRP064423	SRR2545915	Juvenile tuber	33.570
SRP108465	SRR5643513	five period of Gastrodia elata	27.900
	SRR5643514	five period of Gastrodia elata	39.730
	SRR5643515	five period of Gastrodia elata	37.240
	SRR5643524	five period of Gastrodia elata	36.670
	SRR5643525	five period of Gastrodia elata	20.030
	SRR5643528	five period of Gastrodia elata	28.340
	SRR5643658	five period of Gastrodia elata	26.170
	SRR5643659	five period of Gastrodia elata	28.190
	SRR5643660	five period of Gastrodia elata	28.130
	SRR5643661	five period of Gastrodia elata	23.910
	SRR5643662	five period of Gastrodia elata	23.870
	SRR5643663	five period of Gastrodia elata	23.120
	SRR5643664	five period of Gastrodia elata	20.880
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	31.000
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	20.180
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	35.280
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	29.500
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	31.530
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	30.370
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	33.430
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	31.810
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	52.250
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	42.320
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	48.340
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	48.340
SRP279888	Gastro	Gastrodia elata tuber	22.64
	Juven	Juvenile tuber	26.68
	Mother_Gastro	Mother tuber of Gastrodia elata	25.40
	Mother_Juven	Mother tuber of Juvenile	26.65