Detail information of GWHGAAEX002098/evm.TU.scaffold_115.127


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|475548399|gb|EMT11067.1|7.90E-17hypothetical protein F775_19588 [Aegilops tauschii]
Swissprottr|Q03378|GLOB_ANTMA3.00E-12Floral homeotic protein GLOBOSA
trEMBLtr|W5EVB2|W5EVB2_WHEAT2.00E-17Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_5AL_1FBBE234E.1} (Fragment)
TAIRAT2G266804.00E-15Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011627270792729435-
Transcript Sequence

Network for GWHGAAEX002098

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00319.17SRF-TF41792.80E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMADS-M-type

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.710
SRR2545915Juvenile tuber4.450
SRP108465SRR5643513five period of Gastrodia elata2.550
SRR5643514five period of Gastrodia elata1.930
SRR5643515five period of Gastrodia elata3.560
SRR5643524five period of Gastrodia elata0.690
SRR5643525five period of Gastrodia elata0.910
SRR5643528five period of Gastrodia elata0.870
SRR5643658five period of Gastrodia elata2.290
SRR5643659five period of Gastrodia elata4.630
SRR5643660five period of Gastrodia elata4.350
SRR5643661five period of Gastrodia elata3.060
SRR5643662five period of Gastrodia elata1.340
SRR5643663five period of Gastrodia elata3.180
SRR5643664five period of Gastrodia elata3.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.850
SRR6049655Rhizomagastrodiae_C368-T10_good_13.430
SRR6049656Rhizomagastrodiae_C368-T07_good_15.370
SRR6049657Rhizomagastrodiae_C368-T07_good_13.230
SRR6049658Rhizomagastrodiae_C368-T04_good_13.820
SRR6049659Rhizomagastrodiae_C368-T04_good_14.010
SRR6049660Rhizomagastrodiae_C368-T01_good_14.420
SRR6049661Rhizomagastrodiae_C368-T04_good_15.640
SRR6049662Rhizomagastrodiae_C368-T01_good_16.370
SRR6049663Rhizomagastrodiae_C368-T01_good_15.940
SRR6049664Rhizomagastrodiae_C368-T10_good_14.350
SRR6049665Rhizomagastrodiae_C368-T10_good_14.350
SRP279888GastroGastrodia elata tuber 3.92
JuvenJuvenile tuber1.34
Mother_GastroMother tuber of Gastrodia elata 1.71
Mother_JuvenMother tuber of Juvenile 0.93