Detail information of GWHGAAEX002107/evm.TU.scaffold_115.135


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743815360|ref|XP_010930320.1|0PREDICTED: uncharacterized protein LOC105051529 [Elaeis guineensis]
trEMBLtr|A0A067KB94|A0A067KB94_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP29540.1}
TAIRAT2G318900RAP

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011628806082911395+
Transcript Sequence

Network for GWHGAAEX002107

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08373.9RAP5816362.40E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms46.340
SRR2545915Juvenile tuber41.950
SRP108465SRR5643513five period of Gastrodia elata20.310
SRR5643514five period of Gastrodia elata22.240
SRR5643515five period of Gastrodia elata20.910
SRR5643524five period of Gastrodia elata21.440
SRR5643525five period of Gastrodia elata18.060
SRR5643528five period of Gastrodia elata16.020
SRR5643658five period of Gastrodia elata19.720
SRR5643659five period of Gastrodia elata19.280
SRR5643660five period of Gastrodia elata22.140
SRR5643661five period of Gastrodia elata19.670
SRR5643662five period of Gastrodia elata22.700
SRR5643663five period of Gastrodia elata20.950
SRR5643664five period of Gastrodia elata22.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.200
SRR6049655Rhizomagastrodiae_C368-T10_good_120.660
SRR6049656Rhizomagastrodiae_C368-T07_good_120.820
SRR6049657Rhizomagastrodiae_C368-T07_good_124.650
SRR6049658Rhizomagastrodiae_C368-T04_good_120.070
SRR6049659Rhizomagastrodiae_C368-T04_good_123.920
SRR6049660Rhizomagastrodiae_C368-T01_good_120.950
SRR6049661Rhizomagastrodiae_C368-T04_good_118.150
SRR6049662Rhizomagastrodiae_C368-T01_good_117.950
SRR6049663Rhizomagastrodiae_C368-T01_good_119.820
SRR6049664Rhizomagastrodiae_C368-T10_good_119.930
SRR6049665Rhizomagastrodiae_C368-T10_good_119.930
SRP279888GastroGastrodia elata tuber 29.18
JuvenJuvenile tuber44.29
Mother_GastroMother tuber of Gastrodia elata 16.36
Mother_JuvenMother tuber of Juvenile 35.65