Gene detail

Detail information of GWHGAAEX002113/evm.TU.scaffold_115.141

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695028504\|ref\|XP_009401632.1\|	0	PREDICTED: uncharacterized protein LOC103985610 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0RTZ6\|M0RTZ6_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P20660_001}
TAIR	AT4G02100	9.00E-164	Heat shock protein DnaJ with tetratricopeptide repeat

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000116	3035475	3044575	-

Transcript Sequence
>GWHTAAEX002113 ATGCACCTCAGGACAAAGCTCGAGGGTGAGCGGGTGACCTGGGCACCATTCAACCCCCGAGCACTGTACAACACTTTACAGGCTCGGTGCAAAGGAGGGTCAATCAGGGCATTTGGATCCCGTGATGAGGGAATTACAGGTGACCGCTTGCAACCGGTTAACGGGGAGGCAGTTTCTGCAGACAGGTTCCCATCATTTTCCTCTTTTACAGAAGACACCTTTTTTATTGTTTCCTTCAAATCTCCCTCTCTTATTAATTCCTCCCTGCAGCACTCTGCAGTGGAGGATAACTATTTCTGCTCGGAAATTTGGGGGATAATAACTTCCCCACTTCCTCCAATTTACTCGAAGAGAGGGAAGAAGATTGATGGTCAGACTAGAATGGGCACTTCTCGATCTGCTTCCCTTGAGAAGAAGCATTGGTGGCTGATCAGCCGAAAGGTCGTTCAGAAGAAAATCAGGGAAGCTCGGTCTCTGATTGCGACGCAGGACTCAAATGCTGTGGCTGCTGCGGTAGGAGTTCTCGACAGCGCTCTTAGCATCTTTCCCAGGCATGAAGTGGCGATAGAGCTCAAGGCAAGATCGCTGCTTTTTCTTCGGCGCTATAAGGACGTGGCTGATATGCTTCAGGATTACATTCCAAGCTACCGCTTTTACTTCACCGGAGGCGGCGCCGCCGCCGGCGACGAATCCTCTAGCTCCCTCTCTTCGTCGGATAGTGGAAGAGCGTTCGGTTTGGAGAGCAGAGAAGGCGCCACGTTGCTTCCCAGCAGCGAGGCCCGTTGGAGTGGCTCTGGCTGCTTCTCTGTTTATGGCCTCAGGCGCAAGTTCGCCGCCTGTCTGCGTCGCCCAAGTGAACGAGAAGGGCATTGGAGATACCTTATTTTGGGGCAGGCATGCTGCCACCTTGGCCTATTAGAGGATGCCATGATCCTCCTTCAGACTGGCCGCCGCCATGCCTCTGAGGCTTTCCGCCGCGAAAGCATCTCTCGCTCCGACGACGTCTTCCTCCCGTTTCCCAGCGCCATCCCCGCAATCCCTTCCGCCAACCCAAACCGTAATGGCGGCGGCGGGCCCGCTCCAAGCCCTCTGATTTTCGAGTCTGTATCGGCGTCCCACCTCCTCGCCCACGTCAAGCTCCTCCTCCGCCGCCGCGCCGCCGCGACCTCCGCGCTGGACGCGGGGCACCCCCACGAGGCCGCCCGCCACTTCTCCAAGATCCTAGAGAGCCGGCGCGGAACCCCGCACCCCTTCGCCGCGGCTTGCCTCGTCGGCCGGGCCGCCGCCTACAGGGACGCGGGCCGGGTCGCAGAGGCCATCGCCGACTGCAACCGCGCCCTCGCCCTCGACCCGGCCTCCATCCCGGCACTCTGCGCCCGCGCCGACCTCCTCGAATCCGTTCGGTGCTTCCATGACTGCCTGCGCGATCTTGACCATCTTAAGCTCCTCTATGACACCATAATTCGCGATCGAAAACTCCCCGGGCCGGCCTGGCGGCCGTTGCACTGCGAGATCCGCTACCGTGACATACCCAGCAATCTCCGTGCCCTCGCGGCCAGAATCCAGGGGATCAGGCGGAGGTTTGCAACGGGAGAGGGCAATGCCGTCGACTATCACCGATTGATCGGCATTCGGAGGGGGTGCTCTCGGTCAGAGCTGGACAGGACGCATTTGGTTCTCTCGTTGCGCCACAAGCCGGACAAGGCGGGGTCTTTTGTCGACCGTCTCGATTTCGCCGACGAGCACCGGGACCCCGACACCATGAAGGACCAAGCCAGGATGTCGGCGCTCATTTTGTATAGGCTGTTGCAGAAAGGGTACATGTGCATCGCGAAGATGATTAGGGACGAGGAGGTTGCGGAAATGGCGCGGGCGGCGGCCGCGAGTCTGGCCGAGGAGCAGAATTCGGTTCCGGCCAAGGCGCACGAGAAACAGCAGCCGTTGTTGCCGCCGTCGGTGTACCAAGGGGTGTTCTGCCGGGACGTGGCGACGGCGGGGAGCATTATGTCGCACGCCATTTCGGTGAATTGCGAGGCTATGATTTGCTGA

Network for GWHGAAEX002113

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module13

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13432.5	TPR_16	386	453	4.10E-08

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.600
SRP064423	SRR2545915	Juvenile tuber	1.470
SRP108465	SRR5643513	five period of Gastrodia elata	3.720
	SRR5643514	five period of Gastrodia elata	3.630
	SRR5643515	five period of Gastrodia elata	4.040
	SRR5643524	five period of Gastrodia elata	2.930
	SRR5643525	five period of Gastrodia elata	4.000
	SRR5643528	five period of Gastrodia elata	4.100
	SRR5643658	five period of Gastrodia elata	2.440
	SRR5643659	five period of Gastrodia elata	4.870
	SRR5643660	five period of Gastrodia elata	2.150
	SRR5643661	five period of Gastrodia elata	3.130
	SRR5643662	five period of Gastrodia elata	3.070
	SRR5643663	five period of Gastrodia elata	4.100
	SRR5643664	five period of Gastrodia elata	13.880
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.040
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.510
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.780
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.320
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.570
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.540
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.560
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.140
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.730
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.840
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	8.070
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	8.070
SRP279888	Gastro	Gastrodia elata tuber	2.56
	Juven	Juvenile tuber	2.31
	Mother_Gastro	Mother tuber of Gastrodia elata	1.23
	Mother_Juven	Mother tuber of Juvenile	0.73