Gene detail

Detail information of GWHGAAEX002115/evm.TU.scaffold_115.143

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672115846\|ref\|XP_008781074.1\|	0	PREDICTED: uncharacterized protein LOC103700951 isoform X1 [Phoenix dactylifera]
trEMBL	tr\|A0A067HGH2\|A0A067HGH2_CITSI	0	Uncharacterized protein {ECO:0000313\|EMBL:KDO87041.1}
TAIR	AT1G02660	8.00E-170	alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000116	3097632	3101282	-

Transcript Sequence
>GWHTAAEX002115 TCGGTTTCTAAAATTATCTATGGCATCACCGTCTCTCCCGCCCTGATTTCCTGGACGCCAGATCACAGAAAGAGGAAAGGGAGACGATCAGAAAGTATTGGAGGAATCATCAGGCCTTTTAATAATGGAAGCTCTCCGCTTTATCTATGGCATCTCTTGCCCTTTCATCGCCTTCGGATTAGGCAAGCAGCCGCATCACTACCCGCCGTCCGTTCATATCGCAACCGTCGCACTCCATGAATCCGGATCCATTGCGAATGAGAGATCGAGAGGCTCAAATTGGGCCTCGAAGATTCTGCACGTGGGTTCGTCCTGGGAGGAATGGAGGAAGCAGCATCCCGCCCAGGACGTGGAGGATGAGAGCGATGGATGCGTGCGATGCGGAGGGGCGGATGGGATCGAGGGATTCTCTGCCGAAAAAGAAGAGGACGGGGTTGAGTTCGATCGGGATTCGTTCTCCAGATTTCTCCACCAGGTTCCATTATCCGAGGCGGAGCTCTTCGCCAAGATGTCTTACTTGGGGAAGCTTGCGTATTCCATTCCGAAGATCAAGCCTGTTAGTCTCCTAAAAAACCATGGCCTTCACTATGTGACTTCATCATTGGAGAAGAAAGTCATATTGTCATGTACTGAGAAGCCAACGCCAAACCAAAATAAAAGTTCTTTGGAGCCAACAATTATGAATGGAAATAGTAATTGTCAAGGAAAAAGTGCTCCAAGTATTAATGCTTCTGCAGCTTATCGGATTGCTGCTTCTACTGCCACTTATCTGCAATCTCAAACAAGGAGCATTCTTTCCCAAAAAACTCGGAAGACAGAAAGTGATGGTCTGTCCTTCTGCTCAAATGAAGATAAAAATAGTGCTTCAAGATCTCAAATGATTTCTTTTGTGGCCACCACAAATTCGGTCACTGCTGTCATTGCTGGTGAGGAAGGGATGAAGGATGCTGTTGCAGAGGGCCTGAATTCTGCTAGCTTCTCACCATGTCAGTGGTTTATATGCGATGATGATAAAAGTGGAACTCGATATTTTGTTATTCAGGGCTCAGAGTCTTTGGCATCCTGGCAAACTAATCTCCTATTTGAGCCTATCCAGTTCGAGGGACTGGATGTATTTGTGCACAGGGGCATCTACGAGGCTGCCAGAGGGATTTATCAGCAGATGCTAGCAGAGGTGCAAGCCCACATTAAGCATTATGGTGATTCTGCTACACTCCGCTTCACCGGCCATTCTCTTGGAGGAAGCCTCGCCATTCTCATAAACCTCATGCTTTCAGTTCGAGGAGATGCACCGCCCTCATCTTTGTTGCCGGTTATAACTTTTGGCGCTCCCTCCATCATGTGCAGAGGAGATTACTTGCTTCGCCGGCTGGGCCTGCCACGAAGCCATGTGCAGTCCATCATGTTACACAGAGACATTGTTCCCCGGGCTTTTTCGTGCCACTATCCCCATCAGGTGGCTAAGATTCTCAAGGCTGTCAACAGAAACTTCCGCAATCATCCTTGCCTAAACAACCATAGCCGTCTGTATGCTCCAATGGGGAAGCTTCTGATCCTTCAACCGGAGGAAGCGTACTCACCTCACCACCACCTTCTTCCTCCTGGCAGTGGCCTATACCTAATGTCCCTTTCATTCGAAGAAACTGAAGAATCAATGAAGCTGCTGCAATCTGCTCAGCATGCATTTCTCAACACTCCTCACCCTCTTGAGATTCTCAGCGATCGGCTGGCTTACGGCCCTGAGGGAACCATTTTCAGGGACCATGACATGAATTCTTACTTGAAGTCTATACATGGGGTGATTGAAATGGAGCTCAGGCACTTCAAAGAGGCTGAGAGCTTGCGTCGACGGTTAATACGGTGGCCTGGTCTTATTAGCAGCTCCAATGCTGCACCGTTGGACATAGGTAAGCATCTGATTGGCATATCCGGCACACTGAATTGGCTTGCCAGTACTGTTTCTCGGCAAATTTGGGTGGTCATCGTGTTCTTGGGAAATTTATCTATTGCAAGATTAGGGTAACTAAGGCTTATTAGTTTATTTGGATGTTTTATTCTTTCTTCCTCGTCTCTTTTCTTGGATGGTTACCATAAATTTAATTGGGTATTATGTGTATAGAACTAAAGAGATGGAGGTACACAAGTGTAAACTAGAAACATTGTTTTATTCAATTGTTAACAATCAGAAAGTAGTTATGCATTTGCTATGCTTTGTGAATATTGAAGATATTCTATTGTCTAGTGGATGA

Network for GWHGAAEX002115

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01764.24	Lipase_3	303	439	3.80E-25

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006629	Biological Process	lipid metabolic process

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	24.500
SRP064423	SRR2545915	Juvenile tuber	5.340
SRP108465	SRR5643513	five period of Gastrodia elata	7.390
	SRR5643514	five period of Gastrodia elata	6.880
	SRR5643515	five period of Gastrodia elata	5.090
	SRR5643524	five period of Gastrodia elata	3.680
	SRR5643525	five period of Gastrodia elata	67.480
	SRR5643528	five period of Gastrodia elata	46.330
	SRR5643658	five period of Gastrodia elata	81.990
	SRR5643659	five period of Gastrodia elata	3.930
	SRR5643660	five period of Gastrodia elata	4.150
	SRR5643661	five period of Gastrodia elata	3.700
	SRR5643662	five period of Gastrodia elata	3.040
	SRR5643663	five period of Gastrodia elata	2.640
	SRR5643664	five period of Gastrodia elata	3.710
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	10.750
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	7.640
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	9.270
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	28.490
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	48.670
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	61.450
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	18.880
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	44.530
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.590
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	7.520
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.500
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.500
SRP279888	Gastro	Gastrodia elata tuber	3.24
	Juven	Juvenile tuber	2.67
	Mother_Gastro	Mother tuber of Gastrodia elata	43.32
	Mother_Juven	Mother tuber of Juvenile	9.21