Gene detail

Detail information of GWHGAAEX002119/evm.TU.scaffold_115.146

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG4246	2.00E-64	Predicted DNA-binding protein, contains SAP domain
nr	gi\|672115842\|ref\|XP_008781072.1\|	0	PREDICTED: LOW QUALITY PROTEIN: cell division cycle and apoptosis regulator protein 1 [Phoenix dactylifera]
trEMBL	tr\|M5Y4C0\|M5Y4C0_PRUPE	0	Uncharacterized protein {ECO:0000313\|EMBL:EMJ26660.1}
TAIR	AT2G03150	2.00E-64	ATP/GTP-binding protein family

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000116	3146353	3163591	-

Transcript Sequence
>GWHTAAEX002119 CGATCATGTCATTTCCCAAATTCCGTCTGTACGTCGACGAACCCTAGCTATATAATTCATCTACCTGCACTCTCACCCGCAAAAGACCATCGTTCGTTCATATGCCCACGGCCCGCATAGATCTTTTTCCTTTGCTTCATAGTATTTTTTAAGCCCTGACCTTGGAGAATTATTTTGAGAAATAGAAAATGTACCCTTCAAAAGGTGCCGGTGGATATACCGGGCAACAACCTTATGCTACTCAACAGGCTTATGGCCAACTTCCTGGAGCTGGTTTCTCCAGCAATCCTACTACTGGCCCTGACATGGGAGCTCAACATGCGTTGGCATCTCGGCAATCTTCAATAATGGGTGAAACAGCTCAATATGGAGGGCCTTACGCATCTGTCTATGGATCAGCTGCGTTGAGCGGTGGACAACAGGTTAGTGGAGCGAGCAACAAAGGAGCAGCTACTTCAAACCTTCAAGCCCGTACAACATATCCTTCTTCACTAGCTGAGCAGCCTAAATATTCTACTGGAGTTATTGGCTCCGGTTTCAATGACGATTATCTTTCTGCATCTAATCGCGGGTTTGCTCAGAGGGGTGATCAGTTCCCTGGTGTGAAAAATGCTGATTTTGCGATTGATCGGAGAGCTTACGGTGATGGTGCGTATGTTGGAAGGGATTTGCAAAGTGATCAAGCTAGACGATATGCTGATTCTTCTTCTCTTGGCCATCAGCATCAGACTGATTTGCATGATCATATTGATCAGGCATCACTGCTTCGACAGCAGCAAATCATGAAAGCCCAATCGCATCATTCTGTTCCTGATATGAGACAAGCTGAATATCTTGCAGCAAGAGCTGCACCTATTCATCATGGTTCTCAGGAATTTAGTTCGTATGGTGGAAGAATAGATGTGGATCCACATGGTTTACCTATTCTTGGCAGTTCACAATTTGGCCCACCACATTCATCTTCAATTTTAGGAGCTCCAAGACGGACTATTGACGACCTCATCTATGCTCAAGGATCATCAAATGCTGGATATGGTGTTGTTGGCTTACCCCCTGGACGCGATTATATGACAGGGAAGAGTCTTCATGGTCCAACAGGATCTGAATATCAAGGGAGCATTATTCAACGGGATCATTTGAATCTTGGAGTCGCATCACTTACCGATCGCAAAGATGATAGAGATGCTTTTCGTCGGGAACTTGATCTACGAGATGAGGAGCGTCGTCGAGATTTATTGCGGGAGAGAGAGAAGGATCGAGAACGCGAGCGTGAACGAGAAAGAGAACGCGAGCGGGAACGAGAACGCGAAAGAGATCGCCGTGACAGGGAAAGAGAACGAGATCACCGGCGGACACTGGATTCTAGGAGGGAGCGGACACCATCTAGAGCTTCTAGAGATCGCCGAGGTTCTTCTGCAGTAAAGGATGAGAGGTCTCGCCGTGCCTCGCCTCGCCGCAGTCCACCACGTCGAATTTCACCTCGTCGAGTCTCACCACGTCGGGATGCTGTACATAGGCATCGCTCACCTGTGAAAGAAAAAAAGAGAGAATATGTTTGCAAGGTTCATCCATTTTGCTTGGCTGAAGCTGAAAGGGATTATTTGTCCTTAAATAAGAGATATCCTAGGTTATCTATATCTCATGAATTCACAAAGGTTGTTTTGAAGTGGCCACAAGAGAACCTACACCTGTCACTTAATACTCCTGTCAGCTTTGAACATGATTTTGTTGAAGATAACAAAATTGAGGAAATTGTGGTAGCTCCTGCGGAAGATTCATCAAAAAGCACAAATATAATCTGGAATGCAAAGGTTGTATTGATGAGTGGGTTCAGCAGTGATATGTTGGATGAGCTGTGCTCTGATAAAACTTCTGATGACCGGTTAATCCATTTCAACAACATTTTAAGGTTTGCTATTCTTAAAAAGGATCGTTCATTTATGGCTATTGGGGGCCAATGGAAAGGTCCATTGGATGGCGCTGATCCATCCATTGATGATTCTTCGCTGATCCAAACTGCTAGGAGGCATGTTCAAGATATAGCACAACTTGATTTACAAAATTGTCAGCACTGGAACCCTTTTCTCGAGATACACTATAACAGAACAGGTGATGATGGACTATCTAGTTATAAAGAAATCACAGTTTTGTTTGTGCCGGACCTATTGGAATGCTTACCTACACTGGATTCTTGGCGATCTAGGTGGCTTGCTCACAAGAAGGAGATTACAGAGAGGGAGAAGCGACTAGCTTTAAAGAAAGAGAAGAAATCAAATGAAAAAGAGTCAGCAGAAGGTGAACATGTTTTTAGCAAGTCTAAAAAAGTTGCTTCGAGTACAAAATCTGGAAAAGTTGATGAGAAAACAAAAGATGACGATAAGAGAAGCAAAGTGGAGGAGCCTATGGCTGATGGAGATGATTCCAAGGATGAAAGTCATCAGAAAGCGAAAATACTCGAGTCAGCTGAAATTCCTGCTGAAAAGCTTGATGAAGCAATGGCTACTACAGATACAACCGATGAGAAGAAAGGGATTGATCTGTCTCCCACTGATACAACAGTTGAAGTGAAGAAGCCGTTAAGGAAGAAGATTATCAGGAAGGTTGTCAAAGGAAAGGCTACTGATGAAACTGTTATCAAACCTGATGAAGACATGGCTGTAAAGACTACTGAAAATAAACAAACTGACCAAGAAAGTGCTATTCAAATTAATGACAGCTCTGCTGAACCTGAGAAAGCAAAGACAATTGTGAGAAAAAGAATTGTGAAAAAAATTACTTCTGGGAAATCTTCTCAGCAGGAAGAAGAGAAAGATGCTGAGAAGAAATCTGTGCAGGATGTGAAGGATCAGACCGCTGGTGCTGCGCTATCGACAACGGAGGACAAAGTTACTGGGCAGACATCTGAAGCTGTGACTACTGGAAAAAAACGAATTATTAGACGAGTGATTAAGAAAAAGGTTTCAACCACTGAAAATAAACCTTTAGTTTCCCAGACAAAAGATTGTGTGCAAGCAGAGAGTAATACTTCGGTGCTGAAAACCGTCCAAGAGGAAGATTTACCAACAGTAAAAGAAGAACCAAACATGACAGAACCTACGGAAATTAAGATTAAAGAGGAGGCCAAAAAGTTGACGGTTGATAATGATAGCACTTCTGAAAGGAAAACAAATGAGACAAAGGATGACAAAAAGCTGACAAAAGTTGACAAAGTCTCTAAAACTGAAAAGCGTGCAAACACTGAACTCCAGACCCCAAAACACAAGGACTCTGAGAAAGATTTACGTAGTGCCAAAGGAGAAGGATCAAAACAGGACAAGGAAAAGAGTAAGAATGGCAAGGATAAAGATGCTAAGAATGAAGCAAGGAGCAAATCTGCTAAAGATTCAAAGGAAAAAGGAAAGCCTGATGAACCCCCTAAACAACCTGGTTTGTTTCTACAGACCAAGCGGACCAAGGGATCAAAGATTCGTTCACTGTCCCTTTCTTTGGCTGGTCTTTTGGAGTATAATGATAAAGACATTGAAGAGTCAACATTTGAGCTGTCGTTATTTGCTGAGACATTCAATGAAATGCTGCAATATCAAATGGGATGCCGTCTTCTGTTTTTCCTAGAGAAACTACGGAAAAGGTTCGTTAAACACAAGCAACGCAAGAGACAAAGAGAAGCTAAGAATGACAAAGAAAGTGAAGCAGATGTAGCCTCAACAAAGCGCTCAAAGATTGGTGACGATAAGTCTAAAGAGAAGGAACCCCTCAAACCTGAACCACAAGGTTCTGTTGATCAAAATCACATGGAAAACAATGAAGAGAAAGAAGATGAAACTGAAGGTGCTAAATCTGATCTAGACAAGAAGTCAGAAGGCGATGCATATGAGCAAGAAGAAGAAATGGAAGAAATGTATGAAGAGTATGATGAGGCGGAGGAAGCAGCAACTGAGGGTGACACAGCTCCCGAGGCTGGTGAAGGCGCCACTGTAACTGTTGCTGGAAACTATAAACCCGAGGTGCCAACAGCGGATGAGCAAAGCAAGGAAAGCAAGAATGAAAAGACGGAAAATGCTGAATCAAATGATGAACAGTGCAATGGCAATTCAAGCAAGGACGGTAAGGAGCAACAGCTGCAGTCAGTGCCTTTGAAAGAAAAGCCCGAGTCTGCAAAGGAGGAGTTTGTTGATAAGGAACTTCTGCAGGCTTTCCGATTCTTCGATTATAATAAAGTCGGATACATCAAGATGGACGATTTGAGATGTTTGCTTCACAATCTAGGAAAATTTCGTTCTCATCGGGATATTAAGGAAATGGTACAGAGCGCATTGTATGAAAGCAGTTCTGCCAGAGATGACCGGATTTTCTACAAGAAGCTTGTGAGGATTAGAGACATATGATATCATCCATCCATCTTCAGTGTAGACTTTCTGCTTTTTTGGTGATCTTTGGTCTAGACTTTTGTAATTTTACATTCCGAGGGTCGAAAACTTTTATGTAATTCTCATGCTAGCATGAGCATGGATTCTGGTCGATGTTTCAGTTAGTTACCCGTTGATATTTTTATTATATGGCATCCATTTTTTTGATAATTAAAGTTTGCTTCAATAATTTGTTTAAAATTTAGATAATCCCGTGTTTTAAAGCTTTTACAAATCATTCCTGTTTTTCTCCCTTTTATTAAGAGTGAATTTATGCTTATATATATTAGGTATAGTGTCAATTTTTCTCCTGAATTCACTTTTGTATGGAAGAAGTGTTGTAGGCAAAGTCTATATATAATATGGTATTTATATTAATTAAAAGTTCAAGTTGTCATTTGCGATGCATTATGTAATTAGTTAAGCC

Network for GWHGAAEX002119

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14443.5	DBC1	568	685	3.80E-40

Protein Sequence

>GWHPAAEX002119
MYPSKGAGGYTGQQPYATQQAYGQLPGAGFSSNPTTGPDMGAQHALASRQSSIMGETAQYGGPYASVYGSAALSGGQQVSGASNKGAATSNLQARTTYPSSLAEQPKYSTGVIGSGFNDDYLSASNRGFAQRGDQFPGVKNADFAIDRRAYGDGAYVGRDLQSDQARRYADSSSLGHQHQTDLHDHIDQASLLRQQQIMKAQSHHSVPDMRQAEYLAARAAPIHHGSQEFSSYGGRIDVDPHGLPILGSSQFGPPHSSSILGAPRRTIDDLIYAQGSSNAGYGVVGLPPGRDYMTGKSLHGPTGSEYQGSIIQRDHLNLGVASLTDRKDDRDAFRRELDLRDEERRRDLLREREKDRERERERERERERERERERDRRDRERERDHRRTLDSRRERTPSRASRDRRGSSAVKDERSRRASPRRSPPRRISPRRVSPRRDAVHRHRSPVKEKKREYVCKVHPFCLAEAERDYLSLNKRYPRLSISHEFTKVVLKWPQENLHLSLNTPVSFEHDFVEDNKIEEIVVAPAEDSSKSTNIIWNAKVVLMSGFSSDMLDELCSDKTSDDRLIHFNNILRFAILKKDRSFMAIGGQWKGPLDGADPSIDDSSLIQTARRHVQDIAQLDLQNCQHWNPFLEIHYNRTGDDGLSSYKEITVLFVPDLLECLPTLDSWRSRWLAHKKEITEREKRLALKKEKKSNEKESAEGEHVFSKSKKVASSTKSGKVDEKTKDDDKRSKVEEPMADGDDSKDESHQKAKILESAEIPAEKLDEAMATTDTTDEKKGIDLSPTDTTVEVKKPLRKKIIRKVVKGKATDETVIKPDEDMAVKTTENKQTDQESAIQINDSSAEPEKAKTIVRKRIVKKITSGKSSQQEEEKDAEKKSVQDVKDQTAGAALSTTEDKVTGQTSEAVTTGKKRIIRRVIKKKVSTTENKPLVSQTKDCVQAESNTSVLKTVQEEDLPTVKEEPNMTEPTEIKIKEEAKKLTVDNDSTSERKTNETKDDKKLTKVDKVSKTEKRANTELQTPKHKDSEKDLRSAKGEGSKQDKEKSKNGKDKDAKNEARSKSAKDSKEKGKPDEPPKQPGLFLQTKRTKGSKIRSLSLSLAGLLEYNDKDIEESTFELSLFAETFNEMLQYQMGCRLLFFLEKLRKRFVKHKQRKRQREAKNDKESEADVASTKRSKIGDDKSKEKEPLKPEPQGSVDQNHMENNEEKEDETEGAKSDLDKKSEGDAYEQEEEMEEMYEEYDEAEEAATEGDTAPEAGEGATVTVAGNYKPEVPTADEQSKESKNEKTENAESNDEQCNGNSSKDGKEQQLQSVPLKEKPESAKEEFVDKELLQAFRFFDYNKVGYIKMDDLRCLLHNLGKFRSHRDIKEMVQSALYESSSARDDRIFYKKLVRIRDI

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005509	Molecular Function	calcium ion binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	67.640
SRP064423	SRR2545915	Juvenile tuber	81.820
SRP108465	SRR5643513	five period of Gastrodia elata	92.690
	SRR5643514	five period of Gastrodia elata	89.590
	SRR5643515	five period of Gastrodia elata	79.820
	SRR5643524	five period of Gastrodia elata	87.010
	SRR5643525	five period of Gastrodia elata	52.290
	SRR5643528	five period of Gastrodia elata	43.530
	SRR5643658	five period of Gastrodia elata	44.770
	SRR5643659	five period of Gastrodia elata	100.020
	SRR5643660	five period of Gastrodia elata	123.910
	SRR5643661	five period of Gastrodia elata	107.090
	SRR5643662	five period of Gastrodia elata	96.200
	SRR5643663	five period of Gastrodia elata	97.800
	SRR5643664	five period of Gastrodia elata	94.600
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	71.320
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	74.930
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	74.180
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	64.420
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	60.120
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	59.820
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	72.120
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	65.780
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	82.800
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	77.330
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	70.550
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	70.550
SRP279888	Gastro	Gastrodia elata tuber	89.54
	Juven	Juvenile tuber	92.70
	Mother_Gastro	Mother tuber of Gastrodia elata	43.38
	Mother_Juven	Mother tuber of Juvenile	64.43