Gene detail

Detail information of GWHGAAEX002124/evm.TU.scaffold_116.7

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1922	2.00E-143	Rho GTPase effector BNI1 and related formins
nr	gi\|596251006\|ref\|XP_007224656.1\|	3.03E-156	hypothetical protein PRUPE_ppa026144mg [Prunus persica]
Swissprot	tr\|O04532\|FH8_ARATH	1.00E-144	Formin-like protein 8 (Precursor)
trEMBL	tr\|F6GSX6\|F6GSX6_VITVI	3.00E-157	Formin-like protein {ECO:0000256\|RuleBase:RU361260}
TAIR	AT1G70140	2.00E-143	formin 8

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000112	453074	474004	+

Transcript Sequence
>GWHTAAEX002124 CAAAAAGCTACCGCCAGGCAAAGTCCACTATAGACGCCGAGAAGCATAAAGCAGAGAGAGGCTGACAAATCTACCAACAGCCTTTCTCTCCTCTGTTCCCATGTCCGATTCGAAATCTGTCAGGCATGGACGCATCTCCCCGTTCCTCCTCTTCATCTGCTCCTCAATTCTACCTCTCTCGGGCGCCTCCTCCTATCCTCGGCGCCATCTTCTCCAAAACCAGAACATCCAGACCTTCTTCCCCTCGGCCGGCCCATCTCCTCCGCCCTCCTTCTCCTCCTCTCCCTCCGGTAAAAACATCCCCGCTGCCGTCGCCATCACGGCGGCTAGCACCTTCGCTCTTTCCACCCTCCTCTTCTTCGCCTTCTGCCGCTTCGCCTCAAAGCGCGGGCGGGCTAATCCCGTTCCCATGAACGGACACGCCAGCAACGCCCTCTTCTGGACATCCCTCGATGATACCGAGGCGCCGATGCTATGCGATCACTGCAACTTCCTCCTTCGAGAATCGCTTGATGGGATAGACCAGAGCCAACAAGTTCCGCACCCAGAGAGTTTTTCCTTCAAGCCCGTCCCTAATTCGCCCTCCCCCACTCCTGAGAAATCCCTTCCGCTTCTCCCGGAAGCGCCAGCGCCTCCGGCCATAAAGATCTCTGGGCCGCCTCCGCCGCCGCCGCTGCCTTCGGCGTCACAAAGAGCGGGAGGCCCACCGCCGCCTCCTCCGGCGTCAAAAAAAGCTGGAGGCCCTCCGCCTCCGCCTCCGGCGTTTAAAAGAGCGGGAGGCCCGCCGCCACCGCCGGATGCCCGGAAGGACCGCCCCAAATTGAAACCTCTGCACTGGGATAAGGTCATGCCGGCGAACGCAGGGCATTCAATGGTTTGGGACAAAATCACTGACGGGTCAATGAGGTTCGATGATGATATGATGGAAGCCCTATTCGGCTACGTTGCCGGGAACCACAAAGCATCGAATTGGAGCTGTTCGTCGGGTTCGGCCGGCAGCAGCCTGCCCAACAATCCGCCTCAAATCCGGCTGATTGATCCCCGCAAATCGCAGAACATCGCCATCATCGTCCGCACCCTCTCCGTTAGCCGTTTGGAGATTCTGGAGGGCTTGAAAGACGGCCAGTCTCTCTCAGCAGACGCCCTCGAGAAGCTCTCCCGCATCTCCCTAGCCCCCGAAGAAGAATCCCTCATCTCTTCGTTCTCCGGCGACCCTTCCCAGCTCCCGGATGCCGAATCATTCCTCTTCCACATCCTCCGCTCAGTCCCCTCCGCCTTTCCCCGCATCGCCGCCCTCCATTTCCTTCGATCCATCTACGAACCCGAAATCCTTCACCTCGAGCGATCCCTCCAAACCCTTGACATTGCTTGCGACGAGCTCCGAACGCGGGACCTCTTCATCAAGCTCCTCGAAGCCATTCTCAAGGCGGGAAATCGGATGAACGCTGGCACATCGCGCGGCAATGCCCAGGCCTTCGATCTCACTGCCCTTCGCAAGCTCTCTGATGTCAAGAGCACCGATGGTAAAACCACTTTGCTCCACTTTGTCGTGCAGGAGGTTGCGAGATCGGAAGGGAAGCGCCGCTCTGCTCTCAACAAGAGCTCCAGCTTTCGCCGATCCGCGAGCCGGAATCACCGGATCTACGCGATGGAGCAGGAGGAGAGGGAAAGGGAGTACATGATGCTGGGCCTGCCAATTGTCGGCGGACTGAGCGCTGATTTCTCTAATGTGAACAAGGCGGCAACAATTGACCACGATTCGCTTGCAGGCGGCTGCACTTCCCTCTCCAGACGGCTTGCCGAGATCCGGCAACTAGTGCTGGGTTGGAAGGAGGAAAAGGGGAATTTCGTACAAGAAATGACGAGCTTCGTTGATGCGGCAGGGGAGAAGATCGAGAAGGTCGAGGTGGAGCGGAAGAGAGTCATGGATAAGGTTAGGAGGACGATCGAGTACTATCAGGGAGGGGTGTCGAAGGAAAAGGAAAAGGAAACTGCAGCGCAATCGCTTCGCTTGTTTGTTATAGTGAGAGATTTCTTGGCAATGATGGATCAAGCTTTTATTGATATTTCTGGAAATCTTCAGAAGACGAAGCCGCCTCCAGCAACCCCCTCATCGCCGCCGGTGATAGAGAAGAAGGCAGAACAAATGCCTGCTGTAATCCCCGCATCTCAAAAAGAGGAACGGATTACTACAAGATTTCCAAACTTGCCGGTTCGATTCTTGTCAGACAATACGATGTCGTCTTCTGATTCCTCGGAAGAAGAAGAAGATGGATTCTGAGGAGATTTTTTTCTTCTTTTTTTTTCTTTTTGCATAGAAATTAATTTGTAACCATTGTTATTCTTGGAAAGCTTGTCTTACATATCAACTAATCTGTTCATATCATAGAAAAACAAAAGAAAGAAAGAAGCTCATGTAATTTATTTTTCTGTTCATATCGTAGAACAACTATGATTTGTAAAACTTAGTTTTAATGGCTACAGATTAGTGATAGAAGGAGCACGTGCCTTGCCATGTTAAGTTAGTGACCATAAAGATCAAGCATGGGAAAATATTGTAATGAGTATTGCTACATTAGTATACATCAAAATATA

Network for GWHGAAEX002124

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02181.22	FH2	235	649	8.80E-92

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.580
SRP064423	SRR2545915	Juvenile tuber	2.530
SRP108465	SRR5643513	five period of Gastrodia elata	8.650
	SRR5643514	five period of Gastrodia elata	5.740
	SRR5643515	five period of Gastrodia elata	7.840
	SRR5643524	five period of Gastrodia elata	6.550
	SRR5643525	five period of Gastrodia elata	10.460
	SRR5643528	five period of Gastrodia elata	12.400
	SRR5643658	five period of Gastrodia elata	13.540
	SRR5643659	five period of Gastrodia elata	5.780
	SRR5643660	five period of Gastrodia elata	4.700
	SRR5643661	five period of Gastrodia elata	4.880
	SRR5643662	five period of Gastrodia elata	4.270
	SRR5643663	five period of Gastrodia elata	5.070
	SRR5643664	five period of Gastrodia elata	5.560
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.300
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	11.590
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.500
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.390
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.640
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.720
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.490
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.570
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.880
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.740
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.070
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.070
SRP279888	Gastro	Gastrodia elata tuber	3.52
	Juven	Juvenile tuber	6.39
	Mother_Gastro	Mother tuber of Gastrodia elata	18.86
	Mother_Juven	Mother tuber of Juvenile	13.36