Detail information of GWHGAAEX002127/evm.TU.scaffold_116.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695010160|ref|XP_009391742.1|6.89E-154PREDICTED: protein ALTERED XYLOGLUCAN 4 [Musa acuminata subsp. malaccensis]
Swissprottr|O04523|TBL27_ARATH3.00E-132Protein ALTERED XYLOGLUCAN 4
trEMBLtr|M0SDF9|M0SDF9_MUSAM3.00E-154Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P10420_001}
TAIRAT1G702301.00E-131TRICHOME BIREFRINGENCE-LIKE 27

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000112757707758951-
Transcript Sequence

Network for GWHGAAEX002127

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14416.5PMR5N581102.50E-19
PF13839.5PC-Esterase1114028.90E-89
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.700
SRR2545915Juvenile tuber9.220
SRP108465SRR5643513five period of Gastrodia elata17.190
SRR5643514five period of Gastrodia elata15.930
SRR5643515five period of Gastrodia elata28.720
SRR5643524five period of Gastrodia elata27.540
SRR5643525five period of Gastrodia elata12.360
SRR5643528five period of Gastrodia elata17.010
SRR5643658five period of Gastrodia elata11.770
SRR5643659five period of Gastrodia elata38.200
SRR5643660five period of Gastrodia elata25.240
SRR5643661five period of Gastrodia elata35.430
SRR5643662five period of Gastrodia elata26.540
SRR5643663five period of Gastrodia elata17.310
SRR5643664five period of Gastrodia elata18.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.920
SRR6049655Rhizomagastrodiae_C368-T10_good_14.540
SRR6049656Rhizomagastrodiae_C368-T07_good_18.460
SRR6049657Rhizomagastrodiae_C368-T07_good_15.020
SRR6049658Rhizomagastrodiae_C368-T04_good_12.550
SRR6049659Rhizomagastrodiae_C368-T04_good_12.390
SRR6049660Rhizomagastrodiae_C368-T01_good_17.540
SRR6049661Rhizomagastrodiae_C368-T04_good_12.610
SRR6049662Rhizomagastrodiae_C368-T01_good_17.270
SRR6049663Rhizomagastrodiae_C368-T01_good_16.480
SRR6049664Rhizomagastrodiae_C368-T10_good_16.430
SRR6049665Rhizomagastrodiae_C368-T10_good_16.430
SRP279888GastroGastrodia elata tuber 7.80
JuvenJuvenile tuber15.97
Mother_GastroMother tuber of Gastrodia elata 61.61
Mother_JuvenMother tuber of Juvenile 24.61