Detail information of GWHGAAEX002130/evm.TU.scaffold_116.20


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|521463069|ref|YP_008150015.1|5.00E-06hypothetical protein SCE1572_17995 [Sorangium cellulosum So0157-2]
nrgi|566173377|ref|XP_002307747.2|2.26E-81hypothetical protein POPTR_0005s26580g [Populus trichocarpa]
trEMBLtr|B9H523|B9H523_POPTR8.00E-82Uncharacterized protein {ECO:0000313|EMBL:EEE94743.2}
TAIRAT1G760203.00E-59Thioredoxin superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011210189141052016+
Transcript Sequence

Network for GWHGAAEX002130

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01323.19DSBA481941.70E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0015035Molecular Functionprotein disulfide oxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms96.220
SRR2545915Juvenile tuber122.530
SRP108465SRR5643513five period of Gastrodia elata71.650
SRR5643514five period of Gastrodia elata140.740
SRR5643515five period of Gastrodia elata89.640
SRR5643524five period of Gastrodia elata139.550
SRR5643525five period of Gastrodia elata98.390
SRR5643528five period of Gastrodia elata119.880
SRR5643658five period of Gastrodia elata154.900
SRR5643659five period of Gastrodia elata43.010
SRR5643660five period of Gastrodia elata33.750
SRR5643661five period of Gastrodia elata55.820
SRR5643662five period of Gastrodia elata55.690
SRR5643663five period of Gastrodia elata57.590
SRR5643664five period of Gastrodia elata51.790
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_192.790
SRR6049655Rhizomagastrodiae_C368-T10_good_1155.580
SRR6049656Rhizomagastrodiae_C368-T07_good_1110.680
SRR6049657Rhizomagastrodiae_C368-T07_good_182.990
SRR6049658Rhizomagastrodiae_C368-T04_good_167.230
SRR6049659Rhizomagastrodiae_C368-T04_good_153.280
SRR6049660Rhizomagastrodiae_C368-T01_good_169.150
SRR6049661Rhizomagastrodiae_C368-T04_good_164.630
SRR6049662Rhizomagastrodiae_C368-T01_good_1117.440
SRR6049663Rhizomagastrodiae_C368-T01_good_193.220
SRR6049664Rhizomagastrodiae_C368-T10_good_1164.830
SRR6049665Rhizomagastrodiae_C368-T10_good_1164.830
SRP279888GastroGastrodia elata tuber 39.16
JuvenJuvenile tuber59.39
Mother_GastroMother tuber of Gastrodia elata 84.99
Mother_JuvenMother tuber of Juvenile 82.94