Gene detail

Detail information of GWHGAAEX002133/evm.TU.scaffold_116.28

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG1471	Phosphatidylinositol transfer protein SEC14 and related proteins
nr	gi\|743766156\|ref\|XP_010913311.1\|	PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH13-like [Elaeis guineensis]
Swissprot	tr\|Q501H5\|SFH13_ARATH	Phosphatidylinositol/phosphatidylcholine transfer protein SFH13
trEMBL	tr\|M0SVJ9\|M0SVJ9_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P04200_001}
TAIR	AT1G55690	Sec14p-like phosphatidylinositol transfer family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000112	1358575	1392188	+

Transcript Sequence
>GWHTAAEX002133 TTTTTCGTCCTTTCGCTTAACATCACGACCGTCGAATTAAATATGGCGGTACTCTCTATGTGCAGTATCACAAAACACTGTAGTTACCGCCTGGTGAACATCAGTTGAAATGACCAACGGTTCGACTGGCTCCAAACCCGATTGGGCTCGCCTCACCGTCATGGACTGTGGGCGATCTGTGCGTATGAAAACCGCATAAATTGAACGATTGCCACTAATGCTGCAGCAATTTTCTAATGCTCAACATCTTTTTCTGGAAAACAAGTAGAGGAATCGCGGCGACGGCAAGGAATGTATTGAATAATACCTTTTTTTTACCGTTTCAGAAGTTGAAAAATCGTATAGGCAAAGCTATTAACTGAGCTGATGGAGTTGGAAATGATAGATTTCTCGCCGCGACTGAGGTGATTGCAGCTCTGGCGGTTGTAAAAGCCTAAAAGGCAGCTGAGAAGCTATTGCAGGTCATGCATTTTAAATCCTGAGACTCTAAGAGCTCTCTATCTAAAGAAAAACCAATGTATTATAGCGAAGGACTCGAAGGATTCATTCTTCAAGATGAGAAGAAAGACCAAAAGTTAGACTTGGAGAACTCAGAGGATGACAAAAGGAAAACAAAGATTGAGTCCCTCAAGAAAAAAGCTTTGGATGCCTCCACAAAATTTACACATTCCTTGAAGAAAAGAGGGAAGAGAAAAGTTGATTTCAGGGATTCTTCAGTATCTATTGAGGACGTCAGGGACTCAGAAGAGGAGCGATCTGTCTATGCCTTTCGTCAAGAGCTCATTGCTAAAGATTTGTTGCCAGTTAAGCATGATAACTACCATACATTACTTAGGTTTTTGAAGGCAAGGAAATTTGATTTTGCAAAAACAACGCAGATGTGGCAGGAGATGCTTCGTTGGAGAAAAGAGTTTGGAGCTGACACGATAATAGAGGATTTTGATTTTGAGGAACTGGAGAAAGTACATAATTATTATCCTCAAGGTTATCATGGCATTGACAAGGAGGGTAGGCCGGTGTATATTGAGAGACTTGGAAAGATTGAGCCAAACAAGCTTATGCACATTACTAATTTGGAACGCTACCTCAAATATCATGTGCAAGAATTTGAGAAAGCATTTCTAGAAAAGTTTCCTGCTTGCTCGGTTGCAGCAAAAAAACGCATTAATACGACAACAACAATATTGGATGTGCAGGGCGTGGGATGGAAACATTGGAGTAAAGCTGCGAGGGACCTTGTAATAAATATTCAAAAAATAGATAGTGATTACTATCCTGAGACATTGCATCAGATGTTCATTTTAAATGCTGGTTCTGGGTTCAAGCTCATTTGGAACACAGTAAAGAGTTTTCTTGATCCCAAAACTACTGCAAAAATACATTTGCTTGGATCAAAATATCAAAGTAGATTGCTTGACGCCATTGATGCAAGCCAACTTCCTGAAATATTTGGTGGTTTATGCACTTGCTCTGATACTGGAGGTTGCCTTAAATCTAATAAAGGACCGTGGAATGATCCTTTTATCATGAAGGTTGCACGTAATGTTGATGTATCATATGTGAAGCAAGTTAGACAAGAATCTTGTCGACAACAAAGGGGTAGTAGGTCCTGCATAACACTGCAACCACTTAAGGCAAGCTGTTGTGACATATCAACAGCTGAATCAGGATCCGATGCTGATGATAATTGTTCTCCTGATGCACCTAGAAATGCTGAATCTACTCCGCTTGCCCCTGTTCATGAGGAAGTCCGAGCAACTGATTCAAGTTCATATTATAACAGTGAAGATCGCTTTGTTTTTGTTGATAAAGCTGTTGAAAATGGCAATCTAGTGACAGGATCATCTAGTATGGAGGTTAATGGAGCTGGAGAGCAAACCAATCACTATGATAACTTTGGTCAAAGCAGGATAAAAGGAGAATCATTTGAGTTCGTTTTGAGATATGTCGCAAGAACTCTGGTGGCTCTGCTTTTCAAGCTTCTCTCTGCCTTCAATGTTTTGGGCAGTAAACAAAGCAGTCGGGTTGAGCCAATTCATCCTTCAAGTACAGTGATATCAAACGCTGAAGATAATCAAATTGCCGAGTGCGTTAAAGATGACAAAATTTATCCGTGTTTAAAGCGCATGCAGAGGTTAGAGCAACTGTTTAGAGAGCTAAAAAGCAAACCTAATGTGATTCCTGTAGAGAAAGACCGTTTGCTCATGGATTCCTGGGATAGAATCAAATCTATTGAGTTTGATCTTGATAAAACCAAAAGAGTTCTGCAGGCCACTGTAATGAAGCAAACGGAGATTGCTGAAACTCTGAATGCTGTGCAGGAGTACAACATCAGGAAAAGGTCTTTCTTTTGAGAAACAGTAGAAACAAGATACTAAAACTCACAGGAAAATTGATGCAGAGACATGCAGATTCCATTTAATCGTATATCGTTCTCTTGGGGAAAGAATAGCACAATCAAGTTATGGAGCAGAGGGATGCGTTGGTTCATCAGCTGCTTCAGAAAGACAGGCATGCATCACGTGGAGAGCGCATTTTTTTCATGGACGTGGCAATCCTCAGTGTTGCGGCCTTTCATCACAAGCTTCTTGTTAGATAATTTTTCCTTTTTTTTTTTTTTT

Network for GWHGAAEX002133

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03765.14	CRAL_TRIO_N	101	124	2.40E-05
PF00650.19	CRAL_TRIO	149	314	2.30E-34

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	39.620
SRP064423	SRR2545915	Juvenile tuber	24.830
SRP108465	SRR5643513	five period of Gastrodia elata	39.760
	SRR5643514	five period of Gastrodia elata	35.970
	SRR5643515	five period of Gastrodia elata	31.880
	SRR5643524	five period of Gastrodia elata	35.030
	SRR5643525	five period of Gastrodia elata	15.990
	SRR5643528	five period of Gastrodia elata	12.060
	SRR5643658	five period of Gastrodia elata	15.370
	SRR5643659	five period of Gastrodia elata	27.250
	SRR5643660	five period of Gastrodia elata	28.600
	SRR5643661	five period of Gastrodia elata	25.610
	SRR5643662	five period of Gastrodia elata	25.970
	SRR5643663	five period of Gastrodia elata	32.330
	SRR5643664	five period of Gastrodia elata	28.110
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	48.840
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	33.590
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	41.870
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	58.140
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	53.930
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	57.800
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	45.950
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	48.690
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	36.880
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	40.530
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	42.040
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	42.040
SRP279888	Gastro	Gastrodia elata tuber	50.24
	Juven	Juvenile tuber	50.84
	Mother_Gastro	Mother tuber of Gastrodia elata	32.15
	Mother_Juven	Mother tuber of Juvenile	32.66