Detail information of GWHGAAEX002135/evm.TU.scaffold_116.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|389862031|ref|YP_006364271.1|2.00E-53long-chain-fatty-acid--CoA ligase [Modestobacter marinus]
KOGKOG11765.00E-134Acyl-CoA synthetase
nrgi|672177968|ref|XP_008809099.1|2.98E-150PREDICTED: 4-coumarate--CoA ligase-like 1 [Phoenix dactylifera]
Swissprottr|Q7XXL2|4CLL9_ORYSJ3.00E-1464-coumarate--CoA ligase-like 9
trEMBLtr|C5XJK6|C5XJK6_SORBI7.00E-146Putative uncharacterized protein Sb03g000610 {ECO:0000313|EMBL:EER99996.1}
TAIRAT1G629405.00E-134acyl-CoA synthetase 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011214095491411050+
Transcript Sequence

Network for GWHGAAEX002135

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00501.27AMP-binding363313.70E-51
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K019044CL Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Ubiquinone and other terpenoid-quinone biosynthesismap00130
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.010
SRR2545915Juvenile tuber0.500
SRP108465SRR5643513five period of Gastrodia elata0.350
SRR5643514five period of Gastrodia elata0.300
SRR5643515five period of Gastrodia elata0.160
SRR5643524five period of Gastrodia elata0.580
SRR5643525five period of Gastrodia elata1.130
SRR5643528five period of Gastrodia elata1.650
SRR5643658five period of Gastrodia elata1.330
SRR5643659five period of Gastrodia elata0.480
SRR5643660five period of Gastrodia elata0.410
SRR5643661five period of Gastrodia elata0.530
SRR5643662five period of Gastrodia elata0.570
SRR5643663five period of Gastrodia elata0.910
SRR5643664five period of Gastrodia elata0.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.700
SRR6049655Rhizomagastrodiae_C368-T10_good_11.270
SRR6049656Rhizomagastrodiae_C368-T07_good_11.210
SRR6049657Rhizomagastrodiae_C368-T07_good_10.650
SRR6049658Rhizomagastrodiae_C368-T04_good_10.540
SRR6049659Rhizomagastrodiae_C368-T04_good_11.040
SRR6049660Rhizomagastrodiae_C368-T01_good_10.980
SRR6049661Rhizomagastrodiae_C368-T04_good_10.890
SRR6049662Rhizomagastrodiae_C368-T01_good_10.900
SRR6049663Rhizomagastrodiae_C368-T01_good_10.770
SRR6049664Rhizomagastrodiae_C368-T10_good_10.720
SRR6049665Rhizomagastrodiae_C368-T10_good_10.720
SRP279888GastroGastrodia elata tuber 0.19
JuvenJuvenile tuber0.39
Mother_GastroMother tuber of Gastrodia elata 0.82
Mother_JuvenMother tuber of Juvenile 0.55