Detail information of GWHGAAEX002136/CADD00198.1.gene


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|302392636|ref|YP_003828456.1|3.00E-12AMP-dependent synthetase and ligase [Acetohalobium arabaticum DSM 5501]
KOGKOG11763.00E-36Acyl-CoA synthetase
nrgi|590692166|ref|XP_007043984.1|1.36E-36AMP dependent CoA ligase, putative [Theobroma cacao]
Swissprottr|Q9LQ12|4CLL1_ARATH9.00E-374-coumarate--CoA ligase-like 1
trEMBLtr|A0A061E4C1|A0A061E4C1_THECC5.00E-37AMP dependent CoA ligase, putative {ECO:0000313|EMBL:EOX99815.1}
TAIRAT1G629403.00E-36acyl-CoA synthetase 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011214479771449490+
Transcript Sequence

Network for GWHGAAEX002136

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00501.27AMP-binding3624402.20E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K019044CL Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Ubiquinone and other terpenoid-quinone biosynthesismap00130
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.520
SRR2545915Juvenile tuber0.260
SRP108465SRR5643513five period of Gastrodia elata1.440
SRR5643514five period of Gastrodia elata1.350
SRR5643515five period of Gastrodia elata1.180
SRR5643524five period of Gastrodia elata1.340
SRR5643525five period of Gastrodia elata1.690
SRR5643528five period of Gastrodia elata1.640
SRR5643658five period of Gastrodia elata4.060
SRR5643659five period of Gastrodia elata0.980
SRR5643660five period of Gastrodia elata0.800
SRR5643661five period of Gastrodia elata0.220
SRR5643662five period of Gastrodia elata0.700
SRR5643663five period of Gastrodia elata1.230
SRR5643664five period of Gastrodia elata1.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.520
SRR6049655Rhizomagastrodiae_C368-T10_good_10.420
SRR6049656Rhizomagastrodiae_C368-T07_good_10.340
SRR6049657Rhizomagastrodiae_C368-T07_good_10.160
SRR6049658Rhizomagastrodiae_C368-T04_good_10.050
SRR6049659Rhizomagastrodiae_C368-T04_good_10.240
SRR6049660Rhizomagastrodiae_C368-T01_good_10.040
SRR6049661Rhizomagastrodiae_C368-T04_good_10.160
SRR6049662Rhizomagastrodiae_C368-T01_good_10.160
SRR6049663Rhizomagastrodiae_C368-T01_good_10.160
SRR6049664Rhizomagastrodiae_C368-T10_good_10.570
SRR6049665Rhizomagastrodiae_C368-T10_good_10.570
SRP279888GastroGastrodia elata tuber 0.53
JuvenJuvenile tuber0.41
Mother_GastroMother tuber of Gastrodia elata 0.82
Mother_JuvenMother tuber of Juvenile 0.67