Detail information of GWHGAAEX002146/evm.TU.scaffold_116.50


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17271.00E-87Microtubule-binding protein (translationally controlled tumor protein)
nrgi|672132581|ref|XP_008789873.1|3.93E-102PREDICTED: translationally-controlled tumor protein homolog isoform X1 [Phoenix dactylifera]
Swissprottr|Q5J907|TCTP_ELAGV6.00E-104Translationally-controlled tumor protein homolog
trEMBLtr|B3TM14|B3TM14_ELAGV3.00E-102Translationally controlled tumor protein {ECO:0000313|EMBL:ACF06595.1}
TAIRAT3G166401.00E-87translationally controlled tumor protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011225120202515010+
Transcript Sequence

Network for GWHGAAEX002146

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00838.16TCTP11643.70E-52
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1392.910
SRR2545915Juvenile tuber3210.730
SRP108465SRR5643513five period of Gastrodia elata1373.580
SRR5643514five period of Gastrodia elata1164.360
SRR5643515five period of Gastrodia elata1316.090
SRR5643524five period of Gastrodia elata1143.660
SRR5643525five period of Gastrodia elata1101.490
SRR5643528five period of Gastrodia elata711.970
SRR5643658five period of Gastrodia elata681.290
SRR5643659five period of Gastrodia elata2010.770
SRR5643660five period of Gastrodia elata2050.960
SRR5643661five period of Gastrodia elata2406.960
SRR5643662five period of Gastrodia elata2581.710
SRR5643663five period of Gastrodia elata2657.960
SRR5643664five period of Gastrodia elata2462.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11426.340
SRR6049655Rhizomagastrodiae_C368-T10_good_12170.930
SRR6049656Rhizomagastrodiae_C368-T07_good_11292.300
SRR6049657Rhizomagastrodiae_C368-T07_good_11393.060
SRR6049658Rhizomagastrodiae_C368-T04_good_11269.580
SRR6049659Rhizomagastrodiae_C368-T04_good_11313.320
SRR6049660Rhizomagastrodiae_C368-T01_good_11244.930
SRR6049661Rhizomagastrodiae_C368-T04_good_11305.830
SRR6049662Rhizomagastrodiae_C368-T01_good_1851.720
SRR6049663Rhizomagastrodiae_C368-T01_good_1972.090
SRR6049664Rhizomagastrodiae_C368-T10_good_11143.850
SRR6049665Rhizomagastrodiae_C368-T10_good_11143.850
SRP279888GastroGastrodia elata tuber 3,332.05
JuvenJuvenile tuber1,240.38
Mother_GastroMother tuber of Gastrodia elata 675.83
Mother_JuvenMother tuber of Juvenile 864.79