Detail information of GWHGAAEX002161/evm.TU.scaffold_117.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743793754|ref|XP_010924004.1|2.02E-65PREDICTED: uncharacterized protein LOC105046948 [Elaeis guineensis]
trEMBLtr|M0U375|M0U375_MUSAM2.00E-58Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P24680_001}
TAIRAT5G545302.00E-43Protein of unknown function, DUF538

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012016896161703053-
Transcript Sequence

Network for GWHGAAEX002161

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04398.11DUF538291363.80E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.450
SRR2545915Juvenile tuber2.850
SRP108465SRR5643513five period of Gastrodia elata21.740
SRR5643514five period of Gastrodia elata39.810
SRR5643515five period of Gastrodia elata23.670
SRR5643524five period of Gastrodia elata26.290
SRR5643525five period of Gastrodia elata16.740
SRR5643528five period of Gastrodia elata14.230
SRR5643658five period of Gastrodia elata22.330
SRR5643659five period of Gastrodia elata3.940
SRR5643660five period of Gastrodia elata1.560
SRR5643661five period of Gastrodia elata2.190
SRR5643662five period of Gastrodia elata2.230
SRR5643663five period of Gastrodia elata2.380
SRR5643664five period of Gastrodia elata2.200
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.790
SRR6049655Rhizomagastrodiae_C368-T10_good_140.510
SRR6049656Rhizomagastrodiae_C368-T07_good_132.390
SRR6049657Rhizomagastrodiae_C368-T07_good_110.090
SRR6049658Rhizomagastrodiae_C368-T04_good_18.350
SRR6049659Rhizomagastrodiae_C368-T04_good_14.960
SRR6049660Rhizomagastrodiae_C368-T01_good_125.220
SRR6049661Rhizomagastrodiae_C368-T04_good_18.960
SRR6049662Rhizomagastrodiae_C368-T01_good_137.710
SRR6049663Rhizomagastrodiae_C368-T01_good_136.140
SRR6049664Rhizomagastrodiae_C368-T10_good_143.420
SRR6049665Rhizomagastrodiae_C368-T10_good_143.420
SRP279888GastroGastrodia elata tuber 4.46
JuvenJuvenile tuber65.15
Mother_GastroMother tuber of Gastrodia elata 28.14
Mother_JuvenMother tuber of Juvenile 42.75