Detail information of GWHGAAEX002165/evm.TU.scaffold_117.27


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|219848049|ref|YP_002462482.1|4.00E-21peptidyl-prolyl isomerase [Chloroflexus aggregans DSM 9485]
KOGKOG08822.00E-77Cyclophilin-related peptidyl-prolyl cis-trans isomerase
nrgi|720010520|ref|XP_010259274.1|4.34E-95PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-4-like isoform X1 [Nelumbo nucifera]
Swissprottr|Q9C835|CP21D_ARATH5.00E-78Peptidyl-prolyl cis-trans isomerase CYP21-4
trEMBLtr|M5XHW9|M5XHW9_PRUPE7.00E-87Uncharacterized protein {ECO:0000313|EMBL:EMJ25096.1}
TAIRAT3G666542.00E-77Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012017930311813839+
Transcript Sequence

Network for GWHGAAEX002165

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00160.20Pro_isomerase802053.20E-29
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0000413Biological Processprotein peptidyl-prolyl isomerization
GO:0003755Molecular Functionpeptidyl-prolyl cis-trans isomerase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms253.460
SRR2545915Juvenile tuber264.870
SRP108465SRR5643513five period of Gastrodia elata91.690
SRR5643514five period of Gastrodia elata80.300
SRR5643515five period of Gastrodia elata72.850
SRR5643524five period of Gastrodia elata66.590
SRR5643525five period of Gastrodia elata171.310
SRR5643528five period of Gastrodia elata137.920
SRR5643658five period of Gastrodia elata134.250
SRR5643659five period of Gastrodia elata145.680
SRR5643660five period of Gastrodia elata166.410
SRR5643661five period of Gastrodia elata153.650
SRR5643662five period of Gastrodia elata181.520
SRR5643663five period of Gastrodia elata178.040
SRR5643664five period of Gastrodia elata228.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1179.040
SRR6049655Rhizomagastrodiae_C368-T10_good_1122.600
SRR6049656Rhizomagastrodiae_C368-T07_good_1151.540
SRR6049657Rhizomagastrodiae_C368-T07_good_1192.920
SRR6049658Rhizomagastrodiae_C368-T04_good_1231.500
SRR6049659Rhizomagastrodiae_C368-T04_good_1302.280
SRR6049660Rhizomagastrodiae_C368-T01_good_1202.920
SRR6049661Rhizomagastrodiae_C368-T04_good_1232.250
SRR6049662Rhizomagastrodiae_C368-T01_good_1134.840
SRR6049663Rhizomagastrodiae_C368-T01_good_1196.270
SRR6049664Rhizomagastrodiae_C368-T10_good_1119.010
SRR6049665Rhizomagastrodiae_C368-T10_good_1119.010
SRP279888GastroGastrodia elata tuber 250.17
JuvenJuvenile tuber112.13
Mother_GastroMother tuber of Gastrodia elata 75.37
Mother_JuvenMother tuber of Juvenile 68.93