Gene detail

Database	Orthologs	E value	Annotation
KOG	KOG0227	1.00E-94	Splicing factor 3a, subunit 2
nr	gi\|698504796\|ref\|XP_009797896.1\|	1.62E-102	PREDICTED: splicing factor 3A subunit 2-like [Nicotiana sylvestris]
trEMBL	tr\|D8T4H2\|D8T4H2_SELML	8.00E-99	Putative uncharacterized protein {ECO:0000313\|EMBL:EFJ08420.1} (Fragment)
TAIR	AT2G32600	1.00E-94	hydroxyproline-rich glycoprotein family protein

Scaffold	Start	End	Strand
GWHAAEX00000126	485475	486477	+

Transcript Sequence
>GWHTAAEX002177 ATGGATCGTGATTGGGGATCGAAGCCAGGAAGCGGTGGTGCTGCGTCAGCACAGAATGAAGTGATCAATCGGCGAGAGCGACTCCGGCATTTGGCGCTGGAAACTACTGACCTGGCTAAAGATCCCTATTTCATGTGCAGCCACCTCGGCTGCTATGAATGCAAGCTGTGCCTAACGCTTCATAACAATGAGGGGAACTATCTTGCTCACACGCAGGGAATGTGGCACCAGACAAACCTTGCTAAGAGAGCGGCTAGAGAGGCCAAAGACACTCCCACTCAGCCTCAGCCCAACAAGCGCAAAGTTTCCGTTCGCAAGTGTGTTAAGATTGGTAGGCCTAGTTATAGTGTAACAAAATATTATGATTTAGAGACTAAAAAGCATTCTCTTTTATTTCAGATCGAGTATCCTGAAATTGAAGACAACACAAAACCAAGGCATAGGTTCATGTCTTCCTTTGAGCAGAAGGTTCAGGATTGTGATAAGCGATACCAGTATCTGCTGTTTCATGTAGAGCCATATGAAATCATTGCTTTCAAGTGCCATTCCATTGGTCAATGGTTCTTTGGCACCTGGCATTCCACTGAGACTGTTACCTCCTCTTCAAGTGCCTCCACCGCCTCTGCCACCTCCCCAGGGGGCCCCACCTCCACCCATGGGCCCCACAGTCGTCGCGAGGACCCACCGCCACCACCTTCTGCAAATGGTCCACCAATGCCTACTATTCCTCCGCCGATGGTTGAGGCCAGCTCAATAGCGAGCTTTATGCCAGGGCTAAGGCCACCGCCAATGCCTGCCTTTATTGGGCAGCAACAAATGTCTGGCCAGGCTCATTTTCCATCGTCGCCTCCACCGCCACCCAATATGAATCATTAA

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12874.6	zf-met	52	76	0.00063
PF16835.4	SF3A2	110	182	2.40E-24

Protein Sequence

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
K12826	SF3A2, SAP62	Spliceosome	map03040

GO term	Ontology	Name
GO:0003676	Molecular Function	nucleic acid binding
GO:0008270	Molecular Function	zinc ion binding

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.600
SRP064423	SRR2545915	Juvenile tuber	0.560
SRP108465	SRR5643513	five period of Gastrodia elata	0.000
	SRR5643514	five period of Gastrodia elata	0.000
	SRR5643515	five period of Gastrodia elata	0.000
	SRR5643524	five period of Gastrodia elata	0.000
	SRR5643525	five period of Gastrodia elata	0.000
	SRR5643528	five period of Gastrodia elata	0.000
	SRR5643658	five period of Gastrodia elata	0.000
	SRR5643659	five period of Gastrodia elata	0.000
	SRR5643660	five period of Gastrodia elata	0.000
	SRR5643661	five period of Gastrodia elata	0.000
	SRR5643662	five period of Gastrodia elata	0.000
	SRR5643663	five period of Gastrodia elata	0.000
	SRR5643664	five period of Gastrodia elata	0.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.000
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.000
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.000
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.000
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.000
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.000
SRP279888	Gastro	Gastrodia elata tuber	0.00
	Juven	Juvenile tuber	0.00
	Mother_Gastro	Mother tuber of Gastrodia elata	0.00
	Mother_Juven	Mother tuber of Juvenile	0.00