Detail information of GWHGAAEX002182/evm.TU.scaffold_118.13
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|226314392|ref|YP_002774288.1| | 5.00E-94 | aldehyde dehydrogenase [Brevibacillus brevis NBRC 100599] |
| KOG | KOG2454 | 0 | Betaine aldehyde dehydrogenase |
| nr | gi|672115938|ref|XP_008781122.1| | 0 | PREDICTED: aldehyde dehydrogenase 22A1-like isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|Q0WSF1|AL221_ARATH | 0 | Aldehyde dehydrogenase 22A1 (Precursor) |
| trEMBL | tr|M0RPI8|M0RPI8_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P05080_001} |
| TAIR | AT3G66658 | 0 | aldehyde dehydrogenase 22A1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000126 | 1111666 | 1143180 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002182
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00171.21 | Aldedh | 60 | 526 | 8.20E-129 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0016620 | Molecular Function | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
| GO:0016491 | Molecular Function | oxidoreductase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 34.500 |
| SRR2545915 | Juvenile tuber | 23.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 21.990 |
| SRR5643514 | five period of Gastrodia elata | 22.040 | |
| SRR5643515 | five period of Gastrodia elata | 21.490 | |
| SRR5643524 | five period of Gastrodia elata | 22.980 | |
| SRR5643525 | five period of Gastrodia elata | 28.870 | |
| SRR5643528 | five period of Gastrodia elata | 32.130 | |
| SRR5643658 | five period of Gastrodia elata | 28.740 | |
| SRR5643659 | five period of Gastrodia elata | 22.580 | |
| SRR5643660 | five period of Gastrodia elata | 22.550 | |
| SRR5643661 | five period of Gastrodia elata | 23.900 | |
| SRR5643662 | five period of Gastrodia elata | 24.110 | |
| SRR5643663 | five period of Gastrodia elata | 20.780 | |
| SRR5643664 | five period of Gastrodia elata | 22.080 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 31.860 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 21.070 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 25.660 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 38.430 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 43.300 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 46.720 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 35.390 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 36.420 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 26.060 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 28.460 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 24.100 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 24.100 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 29.83 |
| Juven | Juvenile tuber | 35.53 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 45.10 | |
| Mother_Juven | Mother tuber of Juvenile | 39.31 |