Detail information of GWHGAAEX002189/evm.TU.scaffold_118.32


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743825561|ref|XP_010933056.1|1.77E-168PREDICTED: intersectin-2-like isoform X2 [Elaeis guineensis]
trEMBLtr|B8AKN3|B8AKN3_ORYSI3.00E-164Putative uncharacterized protein {ECO:0000313|EMBL:EEC74928.1}
TAIRAT1G314402.00E-115SH3 domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012622422902273503-
Transcript Sequence

Network for GWHGAAEX002189

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14604.5SH3_93524004.10E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.290
SRR2545915Juvenile tuber16.240
SRP108465SRR5643513five period of Gastrodia elata17.820
SRR5643514five period of Gastrodia elata19.970
SRR5643515five period of Gastrodia elata20.340
SRR5643524five period of Gastrodia elata25.160
SRR5643525five period of Gastrodia elata35.940
SRR5643528five period of Gastrodia elata51.010
SRR5643658five period of Gastrodia elata48.590
SRR5643659five period of Gastrodia elata9.140
SRR5643660five period of Gastrodia elata7.650
SRR5643661five period of Gastrodia elata9.840
SRR5643662five period of Gastrodia elata11.770
SRR5643663five period of Gastrodia elata10.230
SRR5643664five period of Gastrodia elata10.130
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.280
SRR6049655Rhizomagastrodiae_C368-T10_good_110.810
SRR6049656Rhizomagastrodiae_C368-T07_good_112.500
SRR6049657Rhizomagastrodiae_C368-T07_good_19.390
SRR6049658Rhizomagastrodiae_C368-T04_good_18.010
SRR6049659Rhizomagastrodiae_C368-T04_good_19.240
SRR6049660Rhizomagastrodiae_C368-T01_good_18.080
SRR6049661Rhizomagastrodiae_C368-T04_good_18.780
SRR6049662Rhizomagastrodiae_C368-T01_good_110.360
SRR6049663Rhizomagastrodiae_C368-T01_good_111.180
SRR6049664Rhizomagastrodiae_C368-T10_good_117.710
SRR6049665Rhizomagastrodiae_C368-T10_good_117.710
SRP279888GastroGastrodia elata tuber 10.03
JuvenJuvenile tuber6.56
Mother_GastroMother tuber of Gastrodia elata 30.23
Mother_JuvenMother tuber of Juvenile 13.07