Detail information of GWHGAAEX002197/evm.TU.scaffold_119.2
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|338737984|ref|YP_004674946.1| | 7.00E-51 | cytochrome P450 [Hyphomicrobium sp. MC1] |
| KOG | KOG0157 | 0 | Cytochrome P450 CYP4/CYP19/CYP26 subfamilies |
| nr | gi|743798497|ref|XP_010925254.1| | 0 | PREDICTED: cytochrome P450 734A6 [Elaeis guineensis] |
| Swissprot | tr|B9X287|C7346_ORYSJ | 0 | Cytochrome P450 734A6 |
| trEMBL | tr|M0WPJ7|M0WPJ7_HORVD | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_53497.1, ECO:0000313|EnsemblPlants:MLOC_53497.2} |
| TAIR | AT2G26710 | 0 | Cytochrome P450 superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000124 | 105361 | 108139 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002197
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 83 | 483 | 1.80E-83 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP72B1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K15639 | CYP734A1, BAS1 | Brassinosteroid biosynthesis | map00905 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0005506 | Molecular Function | iron ion binding |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.950 |
| SRR2545915 | Juvenile tuber | 5.930 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 5.470 |
| SRR5643514 | five period of Gastrodia elata | 4.380 | |
| SRR5643515 | five period of Gastrodia elata | 4.380 | |
| SRR5643524 | five period of Gastrodia elata | 2.260 | |
| SRR5643525 | five period of Gastrodia elata | 1.830 | |
| SRR5643528 | five period of Gastrodia elata | 2.910 | |
| SRR5643658 | five period of Gastrodia elata | 1.550 | |
| SRR5643659 | five period of Gastrodia elata | 11.540 | |
| SRR5643660 | five period of Gastrodia elata | 16.460 | |
| SRR5643661 | five period of Gastrodia elata | 18.270 | |
| SRR5643662 | five period of Gastrodia elata | 8.670 | |
| SRR5643663 | five period of Gastrodia elata | 12.100 | |
| SRR5643664 | five period of Gastrodia elata | 9.210 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 6.010 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 8.580 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 6.090 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 5.960 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 4.570 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 4.220 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 4.720 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 8.270 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.200 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 4.200 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 7.530 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 7.530 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 2.67 |
| Juven | Juvenile tuber | 1.29 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 11.11 | |
| Mother_Juven | Mother tuber of Juvenile | 5.59 |