Gene detail

Detail information of GWHGAAEX002202/evm.TU.scaffold_119.10

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672198442\|ref\|XP_008777332.1\|	0	PREDICTED: DELLA protein GAI-like [Phoenix dactylifera]
Swissprot	tr\|Q84TQ7\|GAI_GOSHI	4.00E-133	DELLA protein GAI
trEMBL	tr\|M5WDJ0\|M5WDJ0_PRUPE	0	Uncharacterized protein {ECO:0000313\|EMBL:EMJ04830.1}
TAIR	AT1G14920	3.00E-131	GRAS family transcription factor family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000124	484562	486007	-

Transcript Sequence
>GWHTAAEX002202 ATGGGAGAATGCTCGTACGGCAAATCGAATTCGCCGTCGGCCGAGATCGACGGGCTACTGGCAGGCGCCGGTTACAGCATACGCCCTTCCGATCTCCACCACGTCGCGGAGCGTCTCGAGAAGCTCGATTCCGCCATGATCGCCGCCGCAGCCGCAGGCCTGCCGCCTGAGTTTCTGTGCTCCGATGCCGTTCACTACAACCCTTCCGATCTAGCTGCCTGGGTCGACTCCATGTCCGCGCTCACATCCCTCTCTTCCCCCTCTTCCCACCCGTCCCCCGTGCCTTGGACGGTCCAGATCTTCCCTGCCGCTCCTCCCCCTCCCCCCGCCGTCGATCCCCTTCCCCCTGAAGACGCCGGAATCAACCTCGTTCACCTCCTCATGTCCTGCGCGGACTCTATCCATTGCGGCGACCTTCCGTCCGCCTCAGCCCTGATCCACCGGATGCGTCTCCTCCTTCCACGTGTCGGCACGTCCTTTGGCATCGGGAAGGTCGCTGGGTACTTCATCGACGCCCTCGACCGCCGCCTGCGGTGTCGTCCTCCGCCGGCGGTGGAGGACGGCATCCTCTACCACTATTTCTACGAATCCAGCCCCTACCTCAAGTTCGCCCACTTCACCGCCAACCAAGCGATCCTCGAGGCGTTCAACGGCCGAGATCGCGTCCACGTCATCGATCTGAGCCTCATGCACGGCCTCCAATGGCCAGCGCTCATCCAAGCCCTAGCTCTACGACCGGGGGGCCCGCCCTTTGTCCGGCTCACTGGGATCGGGCCGCCGGAGGTTCACCAGGTCGGCCGGCGGCTCGCCGACCTTGCCCGGTCCGTCGGGGTGCCTTTTGCCTTCACGCAGCTGGAGGAAATCCGGCCGGATTTGGTCCGTGTCGAGCCAGGGGAAACCCTAGCGGTCAACTCGATTCTGCAGCTGCACCGGTTTCTGTCCGACCCGGGCGCCCCCGGCCCGATCGATTCTGTGCTGAGCTGGGTGAGGGCGCTGCGGCCTAGAATCGTCGCCGTGGTCGAGCAGGAAGCGGACCACAACCGGCCCGCCTTCCTCGACCGGTTCACCGAAGCGCTGTTTTACTACTCGACCGTATTCGACTCTCTGGAGTCGACGGCGGGGGCCGGGGCCGGACCGGAGGTGTATCTGCAGGAGGAGATCTGCAACATCGTATGCTGCGAGGGGGAAGAAAGGGTGGAGCGGCACGAGCCGCTGGCGAGCTGGAGGGCCCGGTTCGGTCAGGCCGGGCTCTGGCCGGTTCATCTGGGTTCGAACGCCTTCAGACAGGCGAGCATGCTCCTGACCCTCTTTTCAGGCGAGGGGTACGGCGTGGAGGAGGTGGACGGCTGCTTGACGCTGAGCTGGCACGGCCGGGCCCTCATCTCAGCTTCCGCTTGGCATGCTGGCGATGACGTCGACTCGCCGCCTGCCGCCTGCCGCCGCTGA

Network for GWHGAAEX002202

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module3

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12041.7	DELLA	17	82	3.00E-22
PF03514.13	GRAS	123	466	2.40E-111

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	GRAS

KEGG pathway

KO	Enzyme	pathway	mapID
K14494	DELLA	Plant hormone signal transduction	map04075

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	65.190
SRP064423	SRR2545915	Juvenile tuber	116.680
SRP108465	SRR5643513	five period of Gastrodia elata	88.470
	SRR5643514	five period of Gastrodia elata	129.440
	SRR5643515	five period of Gastrodia elata	71.480
	SRR5643524	five period of Gastrodia elata	106.660
	SRR5643525	five period of Gastrodia elata	91.520
	SRR5643528	five period of Gastrodia elata	57.010
	SRR5643658	five period of Gastrodia elata	95.470
	SRR5643659	five period of Gastrodia elata	212.090
	SRR5643660	five period of Gastrodia elata	474.260
	SRR5643661	five period of Gastrodia elata	362.530
	SRR5643662	five period of Gastrodia elata	449.590
	SRR5643663	five period of Gastrodia elata	408.610
	SRR5643664	five period of Gastrodia elata	669.530
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	95.230
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	73.700
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	81.970
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	116.150
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	121.580
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	128.150
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	103.840
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	120.390
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	70.340
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	72.800
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	67.400
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	67.400
SRP279888	Gastro	Gastrodia elata tuber	344.57
	Juven	Juvenile tuber	120.34
	Mother_Gastro	Mother tuber of Gastrodia elata	102.11
	Mother_Juven	Mother tuber of Juvenile	121.36