Detail information of GWHGAAEX002218/evm.TU.scaffold_119.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|220931670|ref|YP_002508578.1|2.00E-30hypothetical protein Hore_08260 [Halothermothrix orenii H 168]
KOGKOG44919.00E-91Predicted membrane protein
nrgi|672108594|ref|XP_008785862.1|8.53E-146PREDICTED: transmembrane protein 19 isoform X2 [Phoenix dactylifera]
trEMBLtr|M0T319|M0T319_MUSAM2.00E-138Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P00710_001}
TAIRAT5G199309.00E-91Protein of unknown function DUF92, transmembrane

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012410568961103879+
Transcript Sequence

Network for GWHGAAEX002218

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01940.15DUF92142753.40E-72
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.050
SRR2545915Juvenile tuber9.210
SRP108465SRR5643513five period of Gastrodia elata13.830
SRR5643514five period of Gastrodia elata11.710
SRR5643515five period of Gastrodia elata15.260
SRR5643524five period of Gastrodia elata13.660
SRR5643525five period of Gastrodia elata20.190
SRR5643528five period of Gastrodia elata18.500
SRR5643658five period of Gastrodia elata15.640
SRR5643659five period of Gastrodia elata12.520
SRR5643660five period of Gastrodia elata13.740
SRR5643661five period of Gastrodia elata15.810
SRR5643662five period of Gastrodia elata17.630
SRR5643663five period of Gastrodia elata20.060
SRR5643664five period of Gastrodia elata14.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.200
SRR6049655Rhizomagastrodiae_C368-T10_good_110.410
SRR6049656Rhizomagastrodiae_C368-T07_good_18.550
SRR6049657Rhizomagastrodiae_C368-T07_good_19.400
SRR6049658Rhizomagastrodiae_C368-T04_good_16.620
SRR6049659Rhizomagastrodiae_C368-T04_good_16.570
SRR6049660Rhizomagastrodiae_C368-T01_good_17.540
SRR6049661Rhizomagastrodiae_C368-T04_good_17.140
SRR6049662Rhizomagastrodiae_C368-T01_good_110.340
SRR6049663Rhizomagastrodiae_C368-T01_good_17.050
SRR6049664Rhizomagastrodiae_C368-T10_good_111.500
SRR6049665Rhizomagastrodiae_C368-T10_good_111.500
SRP279888GastroGastrodia elata tuber 8.31
JuvenJuvenile tuber15.38
Mother_GastroMother tuber of Gastrodia elata 13.50
Mother_JuvenMother tuber of Juvenile 18.84