Detail information of GWHGAAEX002225/evm.TU.scaffold_119.35


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|71282552|ref|YP_270567.1|3.00E-27serine protease [Colwellia psychrerythraea 34H]
nrgi|743769670|ref|XP_010915125.1|2.11E-80PREDICTED: subtilisin-like protease SDD1 [Elaeis guineensis]
Swissprottr|O65351|SUBL_ARATH4.00E-53Subtilisin-like protease (Precursor)
trEMBLtr|I1J2W1|I1J2W1_BRADI9.00E-64Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI5G24780.1}
TAIRAT3G140671.00E-52Subtilase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012411778871178937+
Transcript Sequence

Network for GWHGAAEX002225

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00082.21Peptidase_S8511533.10E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0004252Molecular Functionserine-type endopeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.160
SRR2545915Juvenile tuber0.900
SRP108465SRR5643513five period of Gastrodia elata1.100
SRR5643514five period of Gastrodia elata1.390
SRR5643515five period of Gastrodia elata0.310
SRR5643524five period of Gastrodia elata2.160
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.090
SRR5643658five period of Gastrodia elata0.190
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.080
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.820
SRR6049655Rhizomagastrodiae_C368-T10_good_11.030
SRR6049656Rhizomagastrodiae_C368-T07_good_12.170
SRR6049657Rhizomagastrodiae_C368-T07_good_11.080
SRR6049658Rhizomagastrodiae_C368-T04_good_10.580
SRR6049659Rhizomagastrodiae_C368-T04_good_10.170
SRR6049660Rhizomagastrodiae_C368-T01_good_11.330
SRR6049661Rhizomagastrodiae_C368-T04_good_12.180
SRR6049662Rhizomagastrodiae_C368-T01_good_10.870
SRR6049663Rhizomagastrodiae_C368-T01_good_10.400
SRR6049664Rhizomagastrodiae_C368-T10_good_11.360
SRR6049665Rhizomagastrodiae_C368-T10_good_11.360
SRP279888GastroGastrodia elata tuber 0.03
JuvenJuvenile tuber0.05
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 0.15