Gene detail

Detail information of GWHGAAEX002248/evm.TU.scaffold_119.60

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|317052546\|ref\|YP_004113662.1\|	1.00E-66	chaperone protein DnaK [Desulfurispirillum indicum S5]
KOG	KOG0103	0	Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily
nr	gi\|672190698\|ref\|XP_008775317.1\|	0	PREDICTED: heat shock 70 kDa protein 14-like [Phoenix dactylifera]
Swissprot	tr\|Q9S7C0\|HSP7O_ARATH	0	Heat shock 70 kDa protein 14
trEMBL	tr\|M0S9F7\|M0S9F7_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr2P19660_001}
TAIR	AT1G79930	0	heat shock protein 91

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000124	1840714	1852974	-

Transcript Sequence
>GWHTAAEX002248 ATGAGCGTGGTGGGTTTTGACTTCGGCAATGAAAGCTGCATTGTTGCTGTAGCCAGACAGCGCGGAATTGATGTCGTTCTTAACGATGAGTCGAAGCGCGAGACTCCCACCATTGTTTGCTTCGGTGAGAAGCAGCGTTTCATTGGCACAGCCGGGGCTGCTTCTTCCACCATGAACCCAAAAAACGCAGTCTCTCAGATTAAGCGTTTGATTGGCCGGAAATTTTCAGATCCAGACCTACAGTTGGATCTCCAAACATTTCCGTTTTCCGTTTCTGAAGGGCTGGATGGGTTTCCACTTATCCACGCTAGGTACCTTGGTGAGCAGAAGACCTTCTCCCCGACGCAGGTCCTTGCCATGGTTCTCTCAAATATTAAAGGTATTGCTGAGAAGAATCTCAATGCTGCAGTTGTCGATTGTTGCATTGGAATTCCGGTGTATTTCACCGATCTGCAGAGAAGAGCTGTGATGGATGCTGCAACGATTGCGGGATTGCATCCTCTCCGCTTGTTCCATGAGACGACAGCTACAGCTCTGGCTTATGGTATTTATAAGACTGATTTGCCAGAGAACGATCAGCTTAACGTGGCATTTGTTGATGTTGGTCATGCAAGTATGCAGGTTTGTATTGCTGGGTTCAAAAAGGGGCAGCTAAAGATATTATCCCATACATATGATCGATCTCTAGGGGGAAGAGATTTTGATGATGTTCTATTCAAGTACTTTGCAGTCAAGTTCAAGGATGAATATAAGATTGATGTTTATCAGAATGCTCGTGCGTGCATCAGACTTCGTTCTGCATGCGAGAAGCTAAAGAAGATGCTGAGTGCAAACGCTGAGGCGCCATTGAATATTGAATGCTTGATGGATGAGAAGGATGTGAAGGGGTATATAAAGAGAGAGGAATTTGAGCAGATTAGTGTTCAGATACTGGAGCGTGTTAAGGGGCCTCTTGTTAGTGCTCTTCAAGAAGCTGGTTTGACAGTGGAGAATATTCATTCTGTTGAGGTTGTTGGATCGGGATCTCGTGTTCCAGCTGTTATTAGAATTTTAACTGAGTTCTTTGGTAAGGAGCCAAGACGTACAATGAACGCAAGTGAATGTGTTGCCCGTGGCTGTGCTCTTCAATGTGCCATTTTGAGCCCTACTTTCAAAGTTCGGGAGTTTCAGGTGAATGAGAGTTTTCCATTTACCATTGCCCTGTCATGGAAAGGATCTACTAATGAATCACAGCTTGAAGTATTGGATGCTCAGCAAAGTATAGTTTTTCCCAAAGGGAACCAAATTCCAAGTATCAAAGCACTTACATTTTTTAGATCCAATACATTCTCGGTTGATGTCATATATGCTAATGCTAGTGATCTTTGTATTCCTTCCAAGATCAGCACATACACGATTGGACCATTCAAAACTTCTAATAATGAGAGGGCGAAGTTGAAGGTTAAAGTTCGGTTGAATCTCCATGGAATTGTTTCTATTGAATCTGCAACTTTATTGGAGGAGGATGAAATTGATGTTCCAGTCGTATCAGAGAATGCATCAGGCAAAGAAGAAACAAAAATGGACACTGACGATGTAGTTAATAATGATTCAGTTGGGGCTGATGTTAACATGCAAGATGCGAAGAACACAACAGATGCTACTGATGTCGAAAATGGCAAACCAGAGAGTGAAGAAAGGCCTGGAAAGATGGATACAGATACCAAGGCTGGTGCTCCGAAGAAAAAGGTGAAAAAGACCAATGTTCCAGTTACTGAGGTGGTCTATGGGGCAATGCCTTCTTCTGATTTGCAGAAAGCTATAGAGAAGGAGTTTGAAATGGCCCTTCAAGACAGAGTTATGGAGGAAACCAAAGATAAAAAGAATGCTGTCGAGGCCTATGTATATGACATGCGAAACAAGCTTCATGACAAATATCATGAATTTGTAACTTCGTTGGAGACGGAGGAGCTTATTTCCAAGCTTCAGGAGGTTGAGGATTGGCTTTATGAGGATGGAGAGGATGAAACCAAAGGCGTTTACATTGCGAAGCTCGAAGAATTGAAGAAGCAAGGTGACCCCATTGAACTGCGCCACAAGGAGTGGACGGAAAGAGGACCTGCAATTGAGCAGATTGCTTATTGCATTAATAGCTATAGAGAAGCTGCCTTGTCCAAAGATTCTAAATTTGATCATATTGACATTTCTGAGAAGCAAAAGGTTATCAACGAGTGCTCTGAAGCTGAATCATGGCTGAGGGAGAAGCAACAGCAGCAGGATGCCTTGCCGAAACACGCCACTCCTATTTTCCTGTCTGTTGATATCAAGAGGAAAGTCGAGGTGTTGGACAGGTTTTGCAGGCCAATTATGACAAAGCCGAAACCAGCCCCAGTAAAGCCGCAGACCCCTCCACCGCCTCCCCCTCAAAGCGAGGCGCAGCAGCAACAATCCCATGAAGGCAAGTCTGACGATGTTGAAGGGAACAGCAGCCAAGGCTCAGCTTCAGCTGCTGCTTCCGAGCCAATGGAGACAGAGACAACTACCGCAGCATGA

Network for GWHGAAEX002248

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00012.19	HSP70	3	689	6.90E-154

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K09489	HSPA4	Tight junction	map04530
K09489	HSPA4	Antigen processing and presentation	map04612

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	482.140
SRP064423	SRR2545915	Juvenile tuber	779.880
SRP108465	SRR5643513	five period of Gastrodia elata	189.890
	SRR5643514	five period of Gastrodia elata	154.590
	SRR5643515	five period of Gastrodia elata	156.060
	SRR5643524	five period of Gastrodia elata	144.770
	SRR5643525	five period of Gastrodia elata	185.380
	SRR5643528	five period of Gastrodia elata	239.110
	SRR5643658	five period of Gastrodia elata	146.640
	SRR5643659	five period of Gastrodia elata	264.150
	SRR5643660	five period of Gastrodia elata	290.790
	SRR5643661	five period of Gastrodia elata	257.130
	SRR5643662	five period of Gastrodia elata	271.950
	SRR5643663	five period of Gastrodia elata	301.610
	SRR5643664	five period of Gastrodia elata	298.020
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	273.410
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	221.690
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	267.710
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	268.700
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	276.070
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	308.070
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	268.900
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	285.270
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	305.980
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	309.500
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	255.460
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	255.460
SRP279888	Gastro	Gastrodia elata tuber	278.38
	Juven	Juvenile tuber	315.54
	Mother_Gastro	Mother tuber of Gastrodia elata	143.92
	Mother_Juven	Mother tuber of Juvenile	278.32