Detail information of GWHGAAEX002253/evm.TU.scaffold_119.65


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|593797026|ref|XP_007161551.1|6.86E-12hypothetical protein PHAVU_001G079000g [Phaseolus vulgaris]
Swissprottr|Q9FK16|AGP22_ARATH9.00E-11Arabinogalactan peptide 22 (Precursor)
trEMBLtr|V7CW88|V7CW88_PHAVU3.00E-12Uncharacterized protein {ECO:0000313|EMBL:ESW33545.1}
TAIRAT5G532503.00E-10arabinogalactan protein 22

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012419430681944811+
Transcript Sequence

Network for GWHGAAEX002253

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06376.11AGP661001.50E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms32.900
SRR2545915Juvenile tuber17.090
SRP108465SRR5643513five period of Gastrodia elata16.270
SRR5643514five period of Gastrodia elata7.550
SRR5643515five period of Gastrodia elata111.750
SRR5643524five period of Gastrodia elata12.980
SRR5643525five period of Gastrodia elata54.080
SRR5643528five period of Gastrodia elata316.360
SRR5643658five period of Gastrodia elata63.870
SRR5643659five period of Gastrodia elata93.790
SRR5643660five period of Gastrodia elata8.410
SRR5643661five period of Gastrodia elata28.500
SRR5643662five period of Gastrodia elata60.830
SRR5643663five period of Gastrodia elata28.760
SRR5643664five period of Gastrodia elata122.440
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.010
SRR6049655Rhizomagastrodiae_C368-T10_good_11.480
SRR6049656Rhizomagastrodiae_C368-T07_good_119.840
SRR6049657Rhizomagastrodiae_C368-T07_good_19.130
SRR6049658Rhizomagastrodiae_C368-T04_good_112.080
SRR6049659Rhizomagastrodiae_C368-T04_good_19.500
SRR6049660Rhizomagastrodiae_C368-T01_good_124.120
SRR6049661Rhizomagastrodiae_C368-T04_good_110.250
SRR6049662Rhizomagastrodiae_C368-T01_good_17.740
SRR6049663Rhizomagastrodiae_C368-T01_good_119.330
SRR6049664Rhizomagastrodiae_C368-T10_good_114.260
SRR6049665Rhizomagastrodiae_C368-T10_good_114.260
SRP279888GastroGastrodia elata tuber 6.15
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 180.92
Mother_JuvenMother tuber of Juvenile 39.33