Detail information of GWHGAAEX002254/evm.TU.scaffold_119.68


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|697118882|ref|XP_009613382.1|1.46E-11PREDICTED: arabinogalactan peptide 16-like [Nicotiana tomentosiformis]
Swissprottr|O82337|AGP16_ARATH1.00E-12Arabinogalactan peptide 16 (Precursor)
trEMBLtr|M0ZHF3|M0ZHF3_SOLTU1.00E-12Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400000846}
TAIRAT2G463305.00E-12arabinogalactan protein 16

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012419704641972149-
Transcript Sequence

Network for GWHGAAEX002254

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06376.11AGP48813.00E-17
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.420
SRR2545915Juvenile tuber2.180
SRP108465SRR5643513five period of Gastrodia elata2.170
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata11.940
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata23.660
SRR5643658five period of Gastrodia elata1.860
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata6.860
SRR5643663five period of Gastrodia elata1.460
SRR5643664five period of Gastrodia elata1.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.130
SRR6049655Rhizomagastrodiae_C368-T10_good_116.740
SRR6049656Rhizomagastrodiae_C368-T07_good_18.140
SRR6049657Rhizomagastrodiae_C368-T07_good_111.850
SRR6049658Rhizomagastrodiae_C368-T04_good_114.460
SRR6049659Rhizomagastrodiae_C368-T04_good_111.570
SRR6049660Rhizomagastrodiae_C368-T01_good_111.530
SRR6049661Rhizomagastrodiae_C368-T04_good_119.820
SRR6049662Rhizomagastrodiae_C368-T01_good_114.990
SRR6049663Rhizomagastrodiae_C368-T01_good_118.870
SRR6049664Rhizomagastrodiae_C368-T10_good_111.110
SRR6049665Rhizomagastrodiae_C368-T10_good_111.110
SRP279888GastroGastrodia elata tuber 17.93
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 1,345.42
Mother_JuvenMother tuber of Juvenile 25.33