Detail information of GWHGAAEX002261/evm.TU.scaffold_119.78


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|296140197|ref|YP_003647440.1|4.00E-11Curculin domain-containing protein (mannose-binding) lectin [Tsukamurella paurometabola DSM 20162]
nrgi|436825|gb|AAA19577.1|4.61E-29lectin [Epipactis helleborine]
Swissprottr|B2KNH9|LEC_DENFN4.00E-28Mannose-specific lectin (Precursor)
trEMBLtr|Q39728|Q39728_EPIHE2.00E-29Lectin {ECO:0000313|EMBL:AAA19577.1} (Precursor)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012422144452215265-
Transcript Sequence

Network for GWHGAAEX002261

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01453.23B_lectin321066.60E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.510
SRR2545915Juvenile tuber6.990
SRP108465SRR5643513five period of Gastrodia elata21.760
SRR5643514five period of Gastrodia elata19.600
SRR5643515five period of Gastrodia elata12.420
SRR5643524five period of Gastrodia elata12.990
SRR5643525five period of Gastrodia elata8.830
SRR5643528five period of Gastrodia elata4.260
SRR5643658five period of Gastrodia elata7.230
SRR5643659five period of Gastrodia elata6.850
SRR5643660five period of Gastrodia elata11.670
SRR5643661five period of Gastrodia elata9.520
SRR5643662five period of Gastrodia elata12.250
SRR5643663five period of Gastrodia elata9.080
SRR5643664five period of Gastrodia elata16.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_134.980
SRR6049655Rhizomagastrodiae_C368-T10_good_158.080
SRR6049656Rhizomagastrodiae_C368-T07_good_140.800
SRR6049657Rhizomagastrodiae_C368-T07_good_121.510
SRR6049658Rhizomagastrodiae_C368-T04_good_164.550
SRR6049659Rhizomagastrodiae_C368-T04_good_162.110
SRR6049660Rhizomagastrodiae_C368-T01_good_131.280
SRR6049661Rhizomagastrodiae_C368-T04_good_139.100
SRR6049662Rhizomagastrodiae_C368-T01_good_143.110
SRR6049663Rhizomagastrodiae_C368-T01_good_164.570
SRR6049664Rhizomagastrodiae_C368-T10_good_177.210
SRR6049665Rhizomagastrodiae_C368-T10_good_177.210
SRP279888GastroGastrodia elata tuber 27.43
JuvenJuvenile tuber6.61
Mother_GastroMother tuber of Gastrodia elata 27.18
Mother_JuvenMother tuber of Juvenile 7.35