Detail information of GWHGAAEX002264/evm.TU.scaffold_119.81


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|331699057|ref|YP_004335296.1|1.00E-33serine/threonine protein kinase [Pseudonocardia dioxanivorans CB1190]
KOGKOG05950Serine/threonine-protein kinase involved in autophagy
nrgi|743841450|ref|XP_010937525.1|0PREDICTED: serine/threonine-protein kinase apg-1-like isoform X1 [Elaeis guineensis]
Swissprottr|Q93VD3|CIPKN_ARATH2.00E-51CBL-interacting serine/threonine-protein kinase 23
trEMBLtr|F6HL35|F6HL35_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB55552.1}
TAIRAT3G539300Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012423260212350179+
Transcript Sequence

Network for GWHGAAEX002264

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase182741.20E-72
PF12063.7DUF35436236985.50E-07
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyGroup-Pl-3

KEGG pathway

KO Enzyme pathway mapID
K08269ULK2, ATG1 mTOR signaling pathway map04150
Autophagy - animalmap04140
Autophagy - yeastmap04138
Autophagy - othermap04136
Mitophagy - yeastmap04139
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004674Molecular Functionprotein serine/threonine kinase activity
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.380
SRR2545915Juvenile tuber15.430
SRP108465SRR5643513five period of Gastrodia elata11.700
SRR5643514five period of Gastrodia elata14.080
SRR5643515five period of Gastrodia elata14.200
SRR5643524five period of Gastrodia elata13.350
SRR5643525five period of Gastrodia elata26.000
SRR5643528five period of Gastrodia elata29.820
SRR5643658five period of Gastrodia elata28.990
SRR5643659five period of Gastrodia elata13.820
SRR5643660five period of Gastrodia elata14.390
SRR5643661five period of Gastrodia elata14.010
SRR5643662five period of Gastrodia elata14.000
SRR5643663five period of Gastrodia elata16.060
SRR5643664five period of Gastrodia elata18.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.500
SRR6049655Rhizomagastrodiae_C368-T10_good_116.340
SRR6049656Rhizomagastrodiae_C368-T07_good_112.470
SRR6049657Rhizomagastrodiae_C368-T07_good_115.050
SRR6049658Rhizomagastrodiae_C368-T04_good_118.430
SRR6049659Rhizomagastrodiae_C368-T04_good_119.510
SRR6049660Rhizomagastrodiae_C368-T01_good_115.620
SRR6049661Rhizomagastrodiae_C368-T04_good_117.210
SRR6049662Rhizomagastrodiae_C368-T01_good_112.050
SRR6049663Rhizomagastrodiae_C368-T01_good_113.420
SRR6049664Rhizomagastrodiae_C368-T10_good_110.770
SRR6049665Rhizomagastrodiae_C368-T10_good_110.770
SRP279888GastroGastrodia elata tuber 17.81
JuvenJuvenile tuber18.90
Mother_GastroMother tuber of Gastrodia elata 32.31
Mother_JuvenMother tuber of Juvenile 34.30