Detail information of GWHGAAEX002267/evm.TU.scaffold_119.85
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0752 | 1.00E-148 | Mitochondrial solute carrier protein |
| nr | gi|743867805|ref|XP_010905401.1| | 2.06E-171 | PREDICTED: mitochondrial substrate carrier family protein B isoform X1 [Elaeis guineensis] |
| Swissprot | tr|O04619|ADNT1_ARATH | 3.00E-64 | Mitochondrial adenine nucleotide transporter ADNT1 |
| trEMBL | tr|V4V9H1|V4V9H1_9ROSI | 2.00E-169 | Uncharacterized protein {ECO:0000313|EMBL:ESR48834.1} |
| TAIR | AT3G55640 | 1.00E-148 | Mitochondrial substrate carrier family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000124 | 2445274 | 2455932 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002267
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00153.26 | Mito_carr | 65 | 157 | 1.20E-19 |
| PF00153.26 | Mito_carr | 172 | 257 | 1.60E-23 |
| PF00153.26 | Mito_carr | 267 | 360 | 1.00E-24 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0022857 | Molecular Function | transmembrane transporter activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 8.440 |
| SRR2545915 | Juvenile tuber | 9.340 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 10.470 |
| SRR5643514 | five period of Gastrodia elata | 8.000 | |
| SRR5643515 | five period of Gastrodia elata | 9.320 | |
| SRR5643524 | five period of Gastrodia elata | 8.610 | |
| SRR5643525 | five period of Gastrodia elata | 8.260 | |
| SRR5643528 | five period of Gastrodia elata | 16.920 | |
| SRR5643658 | five period of Gastrodia elata | 9.390 | |
| SRR5643659 | five period of Gastrodia elata | 15.980 | |
| SRR5643660 | five period of Gastrodia elata | 15.320 | |
| SRR5643661 | five period of Gastrodia elata | 17.020 | |
| SRR5643662 | five period of Gastrodia elata | 20.820 | |
| SRR5643663 | five period of Gastrodia elata | 19.030 | |
| SRR5643664 | five period of Gastrodia elata | 17.750 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 8.190 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 11.860 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 10.060 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 8.590 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 8.070 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 6.390 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 10.430 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 9.140 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 14.620 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 10.910 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 13.820 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 13.820 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 15.53 |
| Juven | Juvenile tuber | 10.64 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 15.52 | |
| Mother_Juven | Mother tuber of Juvenile | 11.29 |