Detail information of GWHGAAEX002271/evm.TU.scaffold_119.92


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672124196|ref|XP_008785472.1|8.25E-16PREDICTED: copper transporter 6-like [Phoenix dactylifera]
Swissprottr|Q8GWP3|COPT6_ARATH1.00E-09Copper transporter 6
trEMBLtr|A0A068FMS4|A0A068FMS4_ONCHC1.00E-11Copper transporter 6 {ECO:0000313|EMBL:AID66717.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012426679812668364-
Transcript Sequence

Network for GWHGAAEX002271

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14686SLC31A1, CTR1 Mineral absorption map04978

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.680
SRR2545915Juvenile tuber0.390
SRP108465SRR5643513five period of Gastrodia elata1.730
SRR5643514five period of Gastrodia elata2.010
SRR5643515five period of Gastrodia elata0.400
SRR5643524five period of Gastrodia elata1.370
SRR5643525five period of Gastrodia elata1.080
SRR5643528five period of Gastrodia elata0.450
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.400
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.050
SRR6049655Rhizomagastrodiae_C368-T10_good_13.040
SRR6049656Rhizomagastrodiae_C368-T07_good_12.230
SRR6049657Rhizomagastrodiae_C368-T07_good_13.160
SRR6049658Rhizomagastrodiae_C368-T04_good_13.270
SRR6049659Rhizomagastrodiae_C368-T04_good_16.030
SRR6049660Rhizomagastrodiae_C368-T01_good_10.840
SRR6049661Rhizomagastrodiae_C368-T04_good_12.560
SRR6049662Rhizomagastrodiae_C368-T01_good_13.480
SRR6049663Rhizomagastrodiae_C368-T01_good_16.450
SRR6049664Rhizomagastrodiae_C368-T10_good_11.120
SRR6049665Rhizomagastrodiae_C368-T10_good_11.120
SRP279888GastroGastrodia elata tuber 0.55
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 2.51
Mother_JuvenMother tuber of Juvenile 0.36