Gene detail

Detail information of GWHGAAEX002281/evm.TU.scaffold_119.106

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|695065446\|ref\|XP_009421311.1\|	PREDICTED: uncharacterized protein LOC104000887 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0RI13\|M0RI13_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr10P13870_001}
TAIR	AT2G07360	SH3 domain-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000124	2931962	2981935	+

Transcript Sequence
>GWHTAAEX002281 ATGGCCTCCGGTCAGGACTTCGGAAGAACGTTGATGGATCTCATCACCTCGGATCCCTCGACTGATATTTCCAGTTCCTCACCAGCGGCGGCGGCGGCTCCAACGACACTAGGCAAACCAGTGAACGCTGATCGAAAGCAGAAGAAGGTCACTTTGAGCCAGTTACAGAGCGATACCATTTCGGCTGCGAAGGCTTTGAACCCTGTCAAGGTTCTTCCGCAAAGGCAGAGGAAGAAGTTACCCGTTTCTTATGCCCAATTGACAAGGAGTATCCATGAATTTGCTGCTACGGCAGATCAGAAAAGCTCGCAAAAGAAACTAGTGCATCACGTGTTTCCAAAACTTGCTGTGTACAACTCAGTGGACCCTTCTCTAGCTCCATCCCTTCTTATGCTTCATCAGCAATGTGAAGATAGGAATGTCCTGCGCTATGTTTATTACTACTTGGCTAGAATTTTAGCAGATAATGATGCACAAGGTCTAAGTGCAACTGGTGGAATTCCTACTCCGAATTGGGATGCACTTGCTGATATTGATGCTGTAGGAGGTGTCACTAGAGCAGATGTTGTGCCAAGAGTTGTGGGGCAGCTTAGCTCTGAGGCTTTGAATGCTGATATTGAATTTCATGCACGCAGGCTCGCAGCTTTGAAGGCGCTTAGTTCTGCTTCATCAAGCAGTTCTGATATTCTGGACAAGCTATATGAAATTGTTTTTGGTATTCTAGAAAAGGTAGGAGATGCCAAGCAAAAACGTAAGAAAGGCATCTTTAACAGACCAGGTGGTGATAAGGAGTCGAATATTCAGAACAATTTGCAATATGCTGCTATAAGCGCTCTTAGAAGGCTTCCTCTGGATCCTGGAAATCCAGCCTTCTTACACCGAGCTATACAAGGGATTTCATTCACTGATCCAGTTGCAGTGAGGCATTCTTTGGCTATCATCTCTGAGATAGCAACGAGAGATCCTTATTCTGTAGCTATGGCTTTGGTTAATAAACAAATTTTAGCAGGTGCTTTGCAAGATGTTCTACATTTGCACGATGTCCTTGCAAGGGTTTCCCTAGCTAGGCTTTGTTATATGATATTCCGAGCTCGTTCACTGGATGAACGGCCCGATATAAAGTCACAATTCAACTCTATTCTTTATCAACTTCTTCTTGATCCTAGCGACAGAGTTTGTTTTGAGGCAATTCTTTGTGTATTAGGGAAATTTGATAATACTGAAAGAACTGAAGAACGAGCTGCTGGATGGATTCGTCTGACAAGAGAAATACTGAAGCTGCCAGAGGCCCCGTCTGTAACCTCAAAGGATAATTCAGAGGATGGACTGCCACCAAAACCAGCCAAAGAAAAAGCTTCTAAAACTAGGCGTCCTCAGCCTCTTATTAAGCTTGTAATGAGAAGATTGGAGAGTTCTTTTCGCAGTTTTTCACGCCCTGTACTTCATGCAGCTGCACGGGTTGTTCAAGAATTAGGAAAGAGCAGGTCTGCAGCATATGCATTAGGCGTCTATGATGTAGATGAAGGAGGCCAACTTAGCACATATTCTGATCATGTCGATAATATTGATCTAGATCAACATGAAAGTCAATCTGAAGATTCACGAAAAGCATCATCAATGTTGACTGGAACAGGTGGGAAGGAAACTATTGCCAGCTTATTAGCTTCACTGATGGAAGTAGTTCGCACAACTGTAGCATGTGAATGTGTTTATGTGCGAGGAATGGTTGTAAAAGCTTTGATTTGGATGCAAAACCCATATGATTCATTTGAGGAGTTGAGATCTATTATTGCTTCTGAGTTGTCTGATCCAGCGTGGCCTTCTTCGTTATTGAATGATATTCTACTTACATTGCATGCTCGGTTTAAGGCAACCCCAGATATGGCAGTTACGCTGCTTGAAATTGCCCGAATATTTGCTACCAAAGTACCTGGAAAGATTGATGCTGATGTGCTGCAATTACTGTGGAAAACTTGCCTTGTTGGAGCGGGGCCTGAGGGAAAGCACATTGCATTAGAAGCTGTTACTGTTGTTCTTGATTTACCCCCTCCCCAACCTGGATCTATGTCTGAACTTACGTCTGTTGATGGAATCTCTGCTTCAGATCCAAAGTCAGCTATTGCTTTGCAGAGATTAGTTCAAGCTGCGGTATGGTTTCTTGGTGAAAATGCTAACTATGCGGCATCTGAATATGCTTGGGAATCAGCAACTCCTCCAGGTACTGCATTAATGATGCTGGATGCTGATAAAATGGTTGCAGCTGCCAGTTCTAGAAATCCTACTCTTTCTAGTGCATTAACTCGGCTTCAAAGATGTGCCTTCAGTGGAAGTTGGGAGGTTCGAATTATTGCTGTCCAATCACTTATCACTTTGGCAATTCGGTCAGGAGAGCCTTATAGATTACAAATATATGAGTTCTTACATACATTGGCTCAAGGTGGATTGCAGTCTCACTTTTCAGAGATAACAATTAGTAACGGTGAAGACCAAGGTGCTAGTGGTACCGGTCTTGGATCTTTAATAAGTCCAATGCTACGGCTGCTTGATGAAATATACAAAGGACAGGATGAACTAATGAAAGATATACGTAATCATGGCAACCAAATGCAAGAGTGGACTGATGAAGAACTCAAGAAACTCTACGAAACACATGAAAAACTTCTTGATCTGGTTTCACTTTTTTGTTTTGTTCCAAGAGCTAAATATCTACCTCTAGGGCCTACTAGTTCTAAACTGATTGAAATCTACCGGAATCGGCACAATATTAGTGCTTCCAGCGGTCTAAACGATCCAGCTGTTGCTACTGGAATTTCAGATCTTGTATATGAATCTACTACAAAATCCCCCGAGACAGTTTCTATTGATCCAGACCTGGCAATGGCTTGGGCAGCTAATCTAGGGGAGGGGATGTGGGAAAACAATGCACCGGCAATGGATAGAGTTAACGAATTTCTTTCTGGTGCGGGAACTGATGCCCCGGATGTTGAGGAAGAGAACATTACTTCACGGCCATCAGCCGCTTATGATGATATTTGGGCAAAAACACTCTTGGAAACTTATGAGGCAGAGGAAGATGATGCCAAGTCATCTGGAACATCTTCTCCTGAATCAACGGGCTCAATCGAATCTTCCATATCCTCCCATTTTGGTGGTATGGGATACCCATCCTTGTTCAGTTCTCGCCCATCGGGCTATGGAGTTTCACAGCAATCGGACAGTAGGCCGGCTGCGGCAGGTAGCAGGTTTAGCAGTAATTCGTTTGGAGGCTCCAATTTTGAGGGTTCTCCGATCAGGGAAGAACCTCCGTCATATGCTTCAACGGCTATGCAGAGGTACGGATCATTTGAGAATCCATTGGCTGGGCAGAGCTTTGGCTCACGCAGCAATGACAGCAATGCTCCCTCCGATAATCCGAAATTCGGGAAGGCTTTGTATGACTTCACCGCAGGCGGCGATGACGAGCTAAGTTTGGATGCTGGAGAAGAGGTTGAGATTGAGGATGAGGTTGATGGTTGGTACTATGTGAAGAAGAGAAGGCCGGGGAGGGATGGGAAGCTTGCCGGACTTGTTCCAGTTCTCTATGTCAATTTATCTTGA

Network for GWHGAAEX002281

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14604.5	SH3_9	1143	1195	2.00E-08

Protein Sequence

>GWHPAAEX002281
MASGQDFGRTLMDLITSDPSTDISSSSPAAAAAPTTLGKPVNADRKQKKVTLSQLQSDTISAAKALNPVKVLPQRQRKKLPVSYAQLTRSIHEFAATADQKSSQKKLVHHVFPKLAVYNSVDPSLAPSLLMLHQQCEDRNVLRYVYYYLARILADNDAQGLSATGGIPTPNWDALADIDAVGGVTRADVVPRVVGQLSSEALNADIEFHARRLAALKALSSASSSSSDILDKLYEIVFGILEKVGDAKQKRKKGIFNRPGGDKESNIQNNLQYAAISALRRLPLDPGNPAFLHRAIQGISFTDPVAVRHSLAIISEIATRDPYSVAMALVNKQILAGALQDVLHLHDVLARVSLARLCYMIFRARSLDERPDIKSQFNSILYQLLLDPSDRVCFEAILCVLGKFDNTERTEERAAGWIRLTREILKLPEAPSVTSKDNSEDGLPPKPAKEKASKTRRPQPLIKLVMRRLESSFRSFSRPVLHAAARVVQELGKSRSAAYALGVYDVDEGGQLSTYSDHVDNIDLDQHESQSEDSRKASSMLTGTGGKETIASLLASLMEVVRTTVACECVYVRGMVVKALIWMQNPYDSFEELRSIIASELSDPAWPSSLLNDILLTLHARFKATPDMAVTLLEIARIFATKVPGKIDADVLQLLWKTCLVGAGPEGKHIALEAVTVVLDLPPPQPGSMSELTSVDGISASDPKSAIALQRLVQAAVWFLGENANYAASEYAWESATPPGTALMMLDADKMVAAASSRNPTLSSALTRLQRCAFSGSWEVRIIAVQSLITLAIRSGEPYRLQIYEFLHTLAQGGLQSHFSEITISNGEDQGASGTGLGSLISPMLRLLDEIYKGQDELMKDIRNHGNQMQEWTDEELKKLYETHEKLLDLVSLFCFVPRAKYLPLGPTSSKLIEIYRNRHNISASSGLNDPAVATGISDLVYESTTKSPETVSIDPDLAMAWAANLGEGMWENNAPAMDRVNEFLSGAGTDAPDVEEENITSRPSAAYDDIWAKTLLETYEAEEDDAKSSGTSSPESTGSIESSISSHFGGMGYPSLFSSRPSGYGVSQQSDSRPAAAGSRFSSNSFGGSNFEGSPIREEPPSYASTAMQRYGSFENPLAGQSFGSRSNDSNAPSDNPKFGKALYDFTAGGDDELSLDAGEEVEIEDEVDGWYYVKKRRPGRDGKLAGLVPVLYVNLS

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	37.810
SRP064423	SRR2545915	Juvenile tuber	32.090
SRP108465	SRR5643513	five period of Gastrodia elata	26.060
	SRR5643514	five period of Gastrodia elata	25.690
	SRR5643515	five period of Gastrodia elata	26.180
	SRR5643524	five period of Gastrodia elata	26.030
	SRR5643525	five period of Gastrodia elata	25.180
	SRR5643528	five period of Gastrodia elata	23.010
	SRR5643658	five period of Gastrodia elata	24.550
	SRR5643659	five period of Gastrodia elata	26.320
	SRR5643660	five period of Gastrodia elata	27.990
	SRR5643661	five period of Gastrodia elata	25.180
	SRR5643662	five period of Gastrodia elata	24.390
	SRR5643663	five period of Gastrodia elata	27.570
	SRR5643664	five period of Gastrodia elata	28.280
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	33.910
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	24.260
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	33.740
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	32.440
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	34.070
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	33.810
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	31.220
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	32.170
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	34.950
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	34.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	31.520
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	31.520
SRP279888	Gastro	Gastrodia elata tuber	31.82
	Juven	Juvenile tuber	43.16
	Mother_Gastro	Mother tuber of Gastrodia elata	34.67
	Mother_Juven	Mother tuber of Juvenile	47.72