Detail information of GWHGAAEX002282/evm.TU.scaffold_119.107


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17005.00E-107Regulatory protein MLP and related LIM proteins
nrgi|743810603|ref|XP_010928941.1|2.17E-120PREDICTED: LIM domain-containing protein WLIM2b-like [Elaeis guineensis]
Swissprottr|Q9M047|WLI2B_ARATH1.00E-107LIM domain-containing protein WLIM2b {ECO:0000305}
trEMBLtr|A0A067G1C6|A0A067G1C6_CITSI1.00E-116Uncharacterized protein {ECO:0000313|EMBL:KDO69271.1}
TAIRAT3G557705.00E-107GATA type zinc finger transcription factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012429980583021852+
Transcript Sequence

Network for GWHGAAEX002282

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00412.21LIM10656.90E-11
PF00412.21LIM1081631.20E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyLIM

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms40.870
SRR2545915Juvenile tuber49.300
SRP108465SRR5643513five period of Gastrodia elata52.660
SRR5643514five period of Gastrodia elata67.300
SRR5643515five period of Gastrodia elata59.550
SRR5643524five period of Gastrodia elata59.670
SRR5643525five period of Gastrodia elata58.360
SRR5643528five period of Gastrodia elata46.330
SRR5643658five period of Gastrodia elata96.350
SRR5643659five period of Gastrodia elata32.660
SRR5643660five period of Gastrodia elata27.840
SRR5643661five period of Gastrodia elata28.780
SRR5643662five period of Gastrodia elata27.170
SRR5643663five period of Gastrodia elata28.420
SRR5643664five period of Gastrodia elata23.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_156.240
SRR6049655Rhizomagastrodiae_C368-T10_good_172.380
SRR6049656Rhizomagastrodiae_C368-T07_good_160.470
SRR6049657Rhizomagastrodiae_C368-T07_good_148.250
SRR6049658Rhizomagastrodiae_C368-T04_good_175.840
SRR6049659Rhizomagastrodiae_C368-T04_good_166.280
SRR6049660Rhizomagastrodiae_C368-T01_good_150.540
SRR6049661Rhizomagastrodiae_C368-T04_good_155.370
SRR6049662Rhizomagastrodiae_C368-T01_good_151.960
SRR6049663Rhizomagastrodiae_C368-T01_good_154.860
SRR6049664Rhizomagastrodiae_C368-T10_good_193.550
SRR6049665Rhizomagastrodiae_C368-T10_good_193.550
SRP279888GastroGastrodia elata tuber 34.75
JuvenJuvenile tuber33.36
Mother_GastroMother tuber of Gastrodia elata 69.81
Mother_JuvenMother tuber of Juvenile 39.02