Detail information of GWHGAAEX002302/evm.TU.scaffold_12.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|283779092|ref|YP_003369847.1|9.00E-13DNA photolyase FAD-binding protein [Pirellula staleyi DSM 6068]
nrgi|225463946|ref|XP_002268010.1|9.05E-101PREDICTED: uncharacterized protein LOC100241002 isoform X1 [Vitis vinifera]
trEMBLtr|M0TM68|M0TM68_MUSAM3.00E-101Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P03160_001}
TAIRAT3G046501.00E-89FAD/NAD(P)-binding oxidoreductase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000009823568825373+
Transcript Sequence

Network for GWHGAAEX002302

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.320
SRR2545915Juvenile tuber18.730
SRP108465SRR5643513five period of Gastrodia elata15.190
SRR5643514five period of Gastrodia elata13.070
SRR5643515five period of Gastrodia elata12.860
SRR5643524five period of Gastrodia elata12.640
SRR5643525five period of Gastrodia elata8.360
SRR5643528five period of Gastrodia elata8.200
SRR5643658five period of Gastrodia elata5.960
SRR5643659five period of Gastrodia elata21.820
SRR5643660five period of Gastrodia elata22.130
SRR5643661five period of Gastrodia elata22.080
SRR5643662five period of Gastrodia elata25.230
SRR5643663five period of Gastrodia elata21.560
SRR5643664five period of Gastrodia elata22.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.020
SRR6049655Rhizomagastrodiae_C368-T10_good_119.880
SRR6049656Rhizomagastrodiae_C368-T07_good_120.480
SRR6049657Rhizomagastrodiae_C368-T07_good_123.850
SRR6049658Rhizomagastrodiae_C368-T04_good_118.470
SRR6049659Rhizomagastrodiae_C368-T04_good_117.590
SRR6049660Rhizomagastrodiae_C368-T01_good_119.380
SRR6049661Rhizomagastrodiae_C368-T04_good_119.610
SRR6049662Rhizomagastrodiae_C368-T01_good_119.380
SRR6049663Rhizomagastrodiae_C368-T01_good_119.570
SRR6049664Rhizomagastrodiae_C368-T10_good_114.910
SRR6049665Rhizomagastrodiae_C368-T10_good_114.910
SRP279888GastroGastrodia elata tuber 23.56
JuvenJuvenile tuber36.30
Mother_GastroMother tuber of Gastrodia elata 12.72
Mother_JuvenMother tuber of Juvenile 21.06