Detail information of GWHGAAEX002310/evm.TU.scaffold_12.26


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|408406158|ref|YP_006864142.1|4.00E-07DNA methylase domain-containing protein [Candidatus Nitrososphaera gargensis Ga9.2]
nrgi|743786983|ref|XP_010922309.1|2.40E-79PREDICTED: uncharacterized protein LOC105045653 [Elaeis guineensis]
Swissprottr|P37707|B2_DAUCA5.00E-16B2 protein
trEMBLtr|W1PJI3|W1PJI3_AMBTC9.00E-65Uncharacterized protein {ECO:0000313|EMBL:ERN07899.1}
TAIRAT2G329109.00E-40DCD (Development and Cell Death) domain protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000911415351149492+
Transcript Sequence

Network for GWHGAAEX002310

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10539.8Dev_Cell_Death2974183.50E-47
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms93.370
SRR2545915Juvenile tuber96.390
SRP108465SRR5643513five period of Gastrodia elata78.650
SRR5643514five period of Gastrodia elata64.760
SRR5643515five period of Gastrodia elata69.800
SRR5643524five period of Gastrodia elata63.910
SRR5643525five period of Gastrodia elata56.290
SRR5643528five period of Gastrodia elata66.220
SRR5643658five period of Gastrodia elata54.910
SRR5643659five period of Gastrodia elata90.900
SRR5643660five period of Gastrodia elata100.630
SRR5643661five period of Gastrodia elata95.950
SRR5643662five period of Gastrodia elata82.120
SRR5643663five period of Gastrodia elata85.520
SRR5643664five period of Gastrodia elata87.050
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_179.900
SRR6049655Rhizomagastrodiae_C368-T10_good_1124.460
SRR6049656Rhizomagastrodiae_C368-T07_good_188.650
SRR6049657Rhizomagastrodiae_C368-T07_good_1101.100
SRR6049658Rhizomagastrodiae_C368-T04_good_190.290
SRR6049659Rhizomagastrodiae_C368-T04_good_195.680
SRR6049660Rhizomagastrodiae_C368-T01_good_188.190
SRR6049661Rhizomagastrodiae_C368-T04_good_190.000
SRR6049662Rhizomagastrodiae_C368-T01_good_195.210
SRR6049663Rhizomagastrodiae_C368-T01_good_196.060
SRR6049664Rhizomagastrodiae_C368-T10_good_196.790
SRR6049665Rhizomagastrodiae_C368-T10_good_196.790
SRP279888GastroGastrodia elata tuber 67.89
JuvenJuvenile tuber63.89
Mother_GastroMother tuber of Gastrodia elata 32.77
Mother_JuvenMother tuber of Juvenile 61.07