Detail information of GWHGAAEX002318/evm.TU.scaffold_12.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428226923|ref|YP_007111020.1|1.00E-99Ras superfamily GTP-binding protein YlqF [Geitlerinema sp. PCC 7407]
KOGKOG24841.00E-156GTPase
nrgi|695053089|ref|XP_009414621.1|0PREDICTED: mitochondrial ribosome-associated GTPase 1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9M8Z5|NSN1_ARATH6.00E-19Guanine nucleotide-binding protein-like NSN1 {ECO:0000305}
trEMBLtr|M0TVJ9|M0TVJ9_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P32470_001}
TAIRAT4G027901.00E-156GTP-binding family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000914310361453063-
Transcript Sequence

Network for GWHGAAEX002318

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01926.22MMR_HSR12092656.20E-15
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms36.930
SRR2545915Juvenile tuber48.900
SRP108465SRR5643513five period of Gastrodia elata16.220
SRR5643514five period of Gastrodia elata13.410
SRR5643515five period of Gastrodia elata16.140
SRR5643524five period of Gastrodia elata12.250
SRR5643525five period of Gastrodia elata14.330
SRR5643528five period of Gastrodia elata14.510
SRR5643658five period of Gastrodia elata13.940
SRR5643659five period of Gastrodia elata55.010
SRR5643660five period of Gastrodia elata92.430
SRR5643661five period of Gastrodia elata53.970
SRR5643662five period of Gastrodia elata43.310
SRR5643663five period of Gastrodia elata73.960
SRR5643664five period of Gastrodia elata37.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.630
SRR6049655Rhizomagastrodiae_C368-T10_good_119.950
SRR6049656Rhizomagastrodiae_C368-T07_good_117.510
SRR6049657Rhizomagastrodiae_C368-T07_good_118.030
SRR6049658Rhizomagastrodiae_C368-T04_good_126.440
SRR6049659Rhizomagastrodiae_C368-T04_good_121.210
SRR6049660Rhizomagastrodiae_C368-T01_good_116.930
SRR6049661Rhizomagastrodiae_C368-T04_good_123.510
SRR6049662Rhizomagastrodiae_C368-T01_good_117.420
SRR6049663Rhizomagastrodiae_C368-T01_good_117.400
SRR6049664Rhizomagastrodiae_C368-T10_good_116.400
SRR6049665Rhizomagastrodiae_C368-T10_good_116.400
SRP279888GastroGastrodia elata tuber 26.54
JuvenJuvenile tuber14.71
Mother_GastroMother tuber of Gastrodia elata 18.77
Mother_JuvenMother tuber of Juvenile 16.64