Gene detail

Detail information of GWHGAAEX002319/evm.TU.scaffold_12.42

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672114387\|ref\|XP_008776785.1\|	0	PREDICTED: uncharacterized protein At1g04910-like [Phoenix dactylifera]
Swissprot	tr\|Q8W486\|Y1491_ARATH	4.00E-78	Uncharacterized protein At1g04910
trEMBL	tr\|M0RF38\|M0RF38_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr10P03610_001}
TAIR	AT2G01480	0	O-fucosyltransferase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000009	1461318	1541193	+

Transcript Sequence
>GWHTAAEX002319 CTTAGGTTTTCTTTCATTGATACCCAAACTCGTGCGTAGTTTAATAGAAGCAAGCTCTGCCAATCAGCGCACGATTGGAAGCGTAAGCTTAGATTACAACAGCTTAAATGCTTCTGATCGGCCAAGAAAGGCTCGGTTCTCGCGTTTCCTGCATCCAACTTTCCGATCGACTTTCGGCATCGTCTGCTGGACGCCCTCTCCTCTGTTCTTCGCTTTCTCGGCACCCAAGGCAAGAACAGCTCCAAGAAATAGACGCGCGAGAAGAGAAACCATCCAAGAAAGAATGCACCCTGGGATCAATATCGCAATGCCGAATCAAGCGTACATCCGCGTGGGGAGTGTTGGCAGCAGCGGCGGTGGCGCCGCCTTCGGAAACAGCGGAAGCTTTGGCAGCAGCGTTGGGATTGCGAATGGAGGAAGTGGAACGCCTTCGCCTCCTGCTTCACCGAAAAGGTCACCGAGGATTCACCGGAGAGCGGCGAAGGAAGTAGGCGGCGCTGGAGGTCGGAGAATAACTTCGGCAGCGCCGTTGACTCTGGTTCAGAGGATGACATGGATGCTACTCTCTCTGCTGCTCCGTAAACAGGCCATCTTCCTCTTCGCGCCTCTGGTATATGTGTCCGGGATGTTTCTTTACATGGGCACTGTTTCGTTTGATGCCGTCCCTGTGAACATCTCCAGACCACTCAGCTCAGTTTACCGAAGCCCGCAGCTCTACGAACGCGTTCACATCGATATGGACGCCGATAACTCGTCCGAAGGGCTGGAAAATATATGGAAACATGCTAACAAAGGCGGTGGTTGGAAACCTTGTATAAATATGAACGCAACTGGCTTGCCTGAATCAAATGGTTTCATATATGTTGAAGCAAATGGTGGATTGAATCAACAACGCACATCGATATGCAATGCAGTGGCAGTGGCTGGCTATCTTAATGCTACACTTTTAATCCCAAATTTCCATTATCATAGTATTTGGAGAGATCCTAGCAAGTTCAATGATATTTACGATGGAGACTATTTTATTAAAACTCTGCAAAATGATGTACGGGTGATTGATAAAGTTCCAGAATATATAATGGAAAGGTTTGGCCATAATATGAGCAATGTTTACAACTTCAAGATAAAAGCTTGGTCTTCTATTCGATATTATAAGGATGTGGTTCTTCCAAAATTAATTGAAGAAAAGTTTATAAGGATCTCTCCTTTTGCAAATCGGTTATCATTTGATGCCCCACCTGCAGTTCAAAGATTAAGATGTTTGTCAAATTTCGAGGCCTTGAGGTTTTCAAATCCCATAGCAAGTTTGGCCGAAAAGCTTGTTTCACGAATGAAAGAAAGGAGCAAAGATAATGGTGGAAAATATGTTGCAGTTCACCTCCGTTTTGAAGAGGATATGGTTGCTTTCTCATGCTGTGTATTTGATGGCGGGAAGGAGGAGAAGCACGACATGATTGCAGCAAGGGAAAGAGGTTGGAGAGGAAAGTTTACTAAACCTGGTCGTGTTATTAGACCAGATGTTATTAGGACAAATGGAAAATGCCCCCTCACACCTTTGGAAGTTGGACTAATGCTCCGAGGCATGGGATTTAGTAACAAAACATTGATTTACTTGGCTTCCGGAAAGATTTATAAGGCAGAAAAGACCATGCGTCCTCTCGTTGAAATGTTTCCTCTTTTACAAACTAAAGAAACATTAGCATCGGCTGAAGAGCTTGGTCCCTTCACGAACTATTCTTCTAGGCTGGCTGCGCTAGACTACACAGTTTGCCTCAATAGTGAAGTGTTTGTTACAACTCAAGGTGGAAATTTTCCGCATTTTCTTATTGGCCACCGGAGATATCTGTTTGGTGGACATTCCAAGACCATCAAACCTGATAAGAGAAAGCTAGCACAACTTTTTGCTAATCCTAATGTTGGATGGAAAAGTTTGAAGCGTCAGTTGCTGAGCATGAGATCCCATAGCGATGCTAAGGGCATAGAAATAAAAAAACCGAATGATTCCATATACACTTTCCCCTGTCCCGACTGTATGTGCCGCTCAGAAATTTCAAAATACCCACCTGCTGGATGAATGCTCCATAATAATGCACAGCAAGGAATTTATTTCAATTTTTTTGGCTCTTGTGGCACTCATTCTTTGATTGGAAGGCATCCCACAGTGATTGCCCCATCCTTTTTATTTTATTTATTTTTAATTTTTTTTTAACCCTGCAGGCTCCTGCAGAGCACACCAGTTTTTTTTTATTATGTTTAGTATTATTTTTTCCATTGTGGGATCAATGGGGGCATTCCATTCTTGTACATACAGTCTCCAAATCATTAAAGGAAGAGGGCTGATGAAGTTGCCCATTCTTTTTGCCAAGAGCTCTATTATTATACAAGGCCCGCTGCAAAAGGAAAAACAACTAATATGTGATATATCAGATGATGTGATGTAGGATCTACTTAATTGAACAAAGTGGTTCAAGTGGTTATTTAATTATGAGTACCTTTGAGTGTACTGTACTTAATTATTTTTGCAAAACTTTTAAAGGCATATATGATATAATTTTTTATGTGCTCCACTGCTCCTGATTATTTTAACAGAATTGCAAGGCTTTTTAATTTGTATATTTAATCATTAAGTTATAATATTATCAATTTAGTTCAAATCTTTATTGCTGAATACTAACT

Network for GWHGAAEX002319

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module6

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10250.8	O-FucT	191	521	1.70E-74

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT106
Carbohydrate-Active enzymes Family	GT106

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	19.160
SRP064423	SRR2545915	Juvenile tuber	19.890
SRP108465	SRR5643513	five period of Gastrodia elata	7.680
	SRR5643514	five period of Gastrodia elata	7.360
	SRR5643515	five period of Gastrodia elata	8.570
	SRR5643524	five period of Gastrodia elata	6.840
	SRR5643525	five period of Gastrodia elata	11.390
	SRR5643528	five period of Gastrodia elata	11.420
	SRR5643658	five period of Gastrodia elata	12.060
	SRR5643659	five period of Gastrodia elata	5.610
	SRR5643660	five period of Gastrodia elata	5.290
	SRR5643661	five period of Gastrodia elata	5.470
	SRR5643662	five period of Gastrodia elata	4.710
	SRR5643663	five period of Gastrodia elata	5.640
	SRR5643664	five period of Gastrodia elata	4.880
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	14.880
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	13.130
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	16.930
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	17.740
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	34.720
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	32.410
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	25.650
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	28.870
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	15.940
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	23.860
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	16.530
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	16.530
SRP279888	Gastro	Gastrodia elata tuber	22.72
	Juven	Juvenile tuber	9.95
	Mother_Gastro	Mother tuber of Gastrodia elata	25.55
	Mother_Juven	Mother tuber of Juvenile	22.28