Detail information of GWHGAAEX002321/evm.TU.scaffold_12.44


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|190571193|ref|YP_001975551.1|4.00E-97branched-chain alpha-keto acid dehydrogenase subunit E2 [Wolbachia endosymbiont of Culex quinquefasciatus Pel]
KOGKOG05571.00E-163Dihydrolipoamide acetyltransferase
nrgi|743819144|ref|XP_010931437.1|0PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial-like isoform X1 [Elaeis guineensis]
Swissprottr|Q0WQF7|ODP21_ARATH3.00E-164Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial (Precursor)
trEMBLtr|M0U9H9|M0U9H9_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP15700_001}
TAIRAT3G522001.00E-163Dihydrolipoamide acetyltransferase, long form protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000916442961695775+
Transcript Sequence

Network for GWHGAAEX002321

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00364.21Biotin_lipoyl651379.90E-19
PF02817.16E3_binding1842173.60E-09
PF00198.222-oxoacid_dh2624711.00E-68
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00627DLAT, aceF, pdhC Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Glycolysis / Gluconeogenesismap00010
Citrate cycle (TCA cycle)map00020
Pyruvate metabolismmap00620

Gene Ontology

GO term OntologyName
GO:0016746Molecular Functiontransferase activity, transferring acyl groups

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms49.140
SRR2545915Juvenile tuber59.790
SRP108465SRR5643513five period of Gastrodia elata37.020
SRR5643514five period of Gastrodia elata36.020
SRR5643515five period of Gastrodia elata32.770
SRR5643524five period of Gastrodia elata38.660
SRR5643525five period of Gastrodia elata30.460
SRR5643528five period of Gastrodia elata32.620
SRR5643658five period of Gastrodia elata32.850
SRR5643659five period of Gastrodia elata28.390
SRR5643660five period of Gastrodia elata27.340
SRR5643661five period of Gastrodia elata27.350
SRR5643662five period of Gastrodia elata27.020
SRR5643663five period of Gastrodia elata27.740
SRR5643664five period of Gastrodia elata23.520
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.850
SRR6049655Rhizomagastrodiae_C368-T10_good_134.590
SRR6049656Rhizomagastrodiae_C368-T07_good_135.130
SRR6049657Rhizomagastrodiae_C368-T07_good_129.610
SRR6049658Rhizomagastrodiae_C368-T04_good_130.720
SRR6049659Rhizomagastrodiae_C368-T04_good_133.920
SRR6049660Rhizomagastrodiae_C368-T01_good_129.790
SRR6049661Rhizomagastrodiae_C368-T04_good_133.550
SRR6049662Rhizomagastrodiae_C368-T01_good_139.310
SRR6049663Rhizomagastrodiae_C368-T01_good_134.690
SRR6049664Rhizomagastrodiae_C368-T10_good_140.380
SRR6049665Rhizomagastrodiae_C368-T10_good_140.380
SRP279888GastroGastrodia elata tuber 23.96
JuvenJuvenile tuber30.54
Mother_GastroMother tuber of Gastrodia elata 29.39
Mother_JuvenMother tuber of Juvenile 27.79