Gene detail

Detail information of GWHGAAEX002323/evm.TU.scaffold_12.46

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0565	4.00E-154	Inositol polyphosphate 5-phosphatase and related proteins
nr	gi\|743819253\|ref\|XP_010931468.1\|	0	PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 [Elaeis guineensis]
Swissprot	tr\|Q9LR47\|IP5P3_ARATH	3.00E-115	Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2
trEMBL	tr\|M0WHW5\|M0WHW5_HORVD	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:MLOC_51655.12, ECO:0000313\|EnsemblPlants:MLOC_51655.13}
TAIR	AT5G65090	4.00E-154	DNAse I-like superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000009	1785168	1817610	-

Transcript Sequence
>GWHTAAEX002323 ATGAGCTGGGGAAATGACCGGAGAAGAAAGCTCTATTTTCCCTGGATTTCTGGAAAGAAATCGCCATCAAAAAGAAACAAGGACTCACCTAACTACCCTGCCGAACTGCATGATGTCCCTTCTTTTGCAGAATATCACTCGAGCTCTGTAAAAATGAGCTCTGATGAGGCTCTCTCACCACTAACAAACAATTTGAATACCGAGAGCATAAGAATTTTTGTTTCAACTTGGAATGTCGGTGGAAAGCGCCCTCATGATGCACTGAAACTGGATCACCTTCTCATGGAAAACGATAGTTCTGATGTTTATGTACTAGGTTTTCAAGAAGTAGTACCTTTGAATGCTGGAAATGTGCTTGTCATAGAAGACACTGATCCAGCGGTGAAATGGCTCTCTTTGATTTATGAAGCCTTGAATATGCCTTTAGAGCCTGACACAGGCATGCCTTCTAACGTTCCATCTGACTGCATTTCTACTCAAGCTCCCAATACCAAGGCCCCACTATCCCTGTCCTTGAATGGCAGCAGGAATTCGTTATTCTTTCAAAAGATCTCACTGAAGGCTATCAGTAAAACCTTTATCATGGATCAGGGAAAGTCCTTAAAGTCTTGTAACTGCTCCTCAGAACCAGCAAAGAAAAATTCTGTGGACTCATGTTTCCGATGCCGAAATGTGTATTACAGCAGTGAAAATGACTCCGACGAGGAGGAGGATTTACCTAATAGTTCTATGATGATGGATAGGGCTGCTCAATTTAATAGCAGAAGCAACCACATGAGATACAGTCTCATAGCAAGCAAACAGATGGTGGGTATTTTTGTGACTGTGTGGGCAAGAAGAGAGCTTGCGCAACATATACGGCACTTAAGAATATCTTGCATTGGACGTGGGGTAATGGGTTATCTTGGTAACAAGGGTTGCATTTCTGTGAGCATGACATTGCATCAGACTAGTTTCTGTTTCATCTGCAGTCACTTGGCATCTGGGGAAAAAGAAGGGGATGAACTGAAGAGAAACTCTGATGTTAATGAGATACTAAAGAATACACAATTCCGAAAGATATACAACAAGCATTGTCGAAGAACATCTATGAAAATCCTTGAACATGACCGAATTATTTGGTTTGGAGATTTGAACTATAGAATCGCATTGAGCTATGTTGAAACTAAGAAATTGCTTCAGGACAATGACTGGAATGTACTTTTAGAAAAAGATCAGCTCAAGATTGAAAGAAATGCTGGACGAGTGTTCAGAGGATGGAATGAAGGGTCAATTTACTTTGCTCCAACATACAAGTATTCCGACAACTCAGATTCATATGCTGGGGAAAGTGTCAAATCTAAGACAAAAAGAAGAACTCCTGCATGGTGTGACCGCATATTATGGCATGGTGATGGGATTGTGCAGTTGTCATACATCCGAGGCGAATTTAAGTTTTCAGACCATCGGCCGGTATGTGCCATCTTTAGAGTGGAGATTGGAGTTCTTAATGATAGAGTAAGGGAGAGTTTTTCATTTCCCAACATGAAAATCAGAGTGGAGGAGCTTTTGCCAGGAAACAACACTAACAAGGCTGCCAAGGAAAGAAATTCTGCAGCAAATTCAGAAGATGCTGGGATGATTCAGAGATCTCGCAACAGTTTTGATGATAATAGGAGCTCAAAAAGAAGAGAACATTATTATTTAAAAAGGGCAAAAAAAAAACGTGGATTATCTTGA

Network for GWHGAAEX002323

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module3

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03372.22	Exo_endo_phos	76	482	3.00E-10

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0046856	Biological Process	phosphatidylinositol dephosphorylation

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.570
SRP064423	SRR2545915	Juvenile tuber	4.590
SRP108465	SRR5643513	five period of Gastrodia elata	7.860
	SRR5643514	five period of Gastrodia elata	8.560
	SRR5643515	five period of Gastrodia elata	7.850
	SRR5643524	five period of Gastrodia elata	6.440
	SRR5643525	five period of Gastrodia elata	1.890
	SRR5643528	five period of Gastrodia elata	1.420
	SRR5643658	five period of Gastrodia elata	1.880
	SRR5643659	five period of Gastrodia elata	6.550
	SRR5643660	five period of Gastrodia elata	8.500
	SRR5643661	five period of Gastrodia elata	7.640
	SRR5643662	five period of Gastrodia elata	11.940
	SRR5643663	five period of Gastrodia elata	11.040
	SRR5643664	five period of Gastrodia elata	10.910
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.200
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	8.800
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.130
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	2.720
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	5.460
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.290
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.280
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.180
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.100
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.630
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	12.940
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	12.940
SRP279888	Gastro	Gastrodia elata tuber	14.66
	Juven	Juvenile tuber	6.14
	Mother_Gastro	Mother tuber of Gastrodia elata	3.97
	Mother_Juven	Mother tuber of Juvenile	5.43