Detail information of GWHGAAEX002324/evm.TU.scaffold_12.48


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|17229553|ref|NP_486101.1|2.00E-18hypothetical protein asl2061 [Nostoc sp. PCC 7120]
nrgi|672171786|ref|XP_008805970.1|8.55E-81PREDICTED: uncharacterized protein LOC103718780 [Phoenix dactylifera]
Swissprottr|O78424|YCF19_GUITH5.00E-12Uncharacterized protein ycf19
trEMBLtr|D7U9L1|D7U9L1_VITVI5.00E-75Putative uncharacterized protein {ECO:0000313|EMBL:CBI39425.3}
TAIRAT4G279904.00E-68YGGT family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000918870501911490+
Transcript Sequence

Network for GWHGAAEX002324

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02325.16YGGT1552239.90E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.620
SRR2545915Juvenile tuber12.300
SRP108465SRR5643513five period of Gastrodia elata32.200
SRR5643514five period of Gastrodia elata25.680
SRR5643515five period of Gastrodia elata36.680
SRR5643524five period of Gastrodia elata28.530
SRR5643525five period of Gastrodia elata29.960
SRR5643528five period of Gastrodia elata27.870
SRR5643658five period of Gastrodia elata23.550
SRR5643659five period of Gastrodia elata35.800
SRR5643660five period of Gastrodia elata37.070
SRR5643661five period of Gastrodia elata44.710
SRR5643662five period of Gastrodia elata52.490
SRR5643663five period of Gastrodia elata52.890
SRR5643664five period of Gastrodia elata39.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_134.840
SRR6049655Rhizomagastrodiae_C368-T10_good_161.490
SRR6049656Rhizomagastrodiae_C368-T07_good_134.670
SRR6049657Rhizomagastrodiae_C368-T07_good_125.440
SRR6049658Rhizomagastrodiae_C368-T04_good_122.800
SRR6049659Rhizomagastrodiae_C368-T04_good_117.130
SRR6049660Rhizomagastrodiae_C368-T01_good_120.890
SRR6049661Rhizomagastrodiae_C368-T04_good_127.820
SRR6049662Rhizomagastrodiae_C368-T01_good_139.880
SRR6049663Rhizomagastrodiae_C368-T01_good_127.380
SRR6049664Rhizomagastrodiae_C368-T10_good_140.840
SRR6049665Rhizomagastrodiae_C368-T10_good_140.840
SRP279888GastroGastrodia elata tuber 30.32
JuvenJuvenile tuber31.07
Mother_GastroMother tuber of Gastrodia elata 14.46
Mother_JuvenMother tuber of Juvenile 15.13