Detail information of GWHGAAEX002328/evm.TU.scaffold_12.56


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|296937788|gb|ADH94851.1|1.90E-28hypothetical protein [Aegilops comosa]
trEMBLtr|D7F542|D7F542_AEGCM7.00E-29Putative uncharacterized protein {ECO:0000313|EMBL:ADH94851.1} (Fragment)
TAIRAT5G622702.00E-23Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000920981852120797+
Transcript Sequence

Network for GWHGAAEX002328

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12937.6F-box-like37713.50E-06
PF12298.7Bot1p1341833.90E-06
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.750
SRR2545915Juvenile tuber0.680
SRP108465SRR5643513five period of Gastrodia elata0.500
SRR5643514five period of Gastrodia elata0.380
SRR5643515five period of Gastrodia elata0.150
SRR5643524five period of Gastrodia elata0.140
SRR5643525five period of Gastrodia elata0.340
SRR5643528five period of Gastrodia elata0.500
SRR5643658five period of Gastrodia elata0.250
SRR5643659five period of Gastrodia elata0.270
SRR5643660five period of Gastrodia elata0.590
SRR5643661five period of Gastrodia elata1.050
SRR5643662five period of Gastrodia elata0.300
SRR5643663five period of Gastrodia elata0.680
SRR5643664five period of Gastrodia elata1.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.160
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.400
SRR6049657Rhizomagastrodiae_C368-T07_good_10.960
SRR6049658Rhizomagastrodiae_C368-T04_good_11.360
SRR6049659Rhizomagastrodiae_C368-T04_good_11.070
SRR6049660Rhizomagastrodiae_C368-T01_good_10.930
SRR6049661Rhizomagastrodiae_C368-T04_good_12.280
SRR6049662Rhizomagastrodiae_C368-T01_good_10.490
SRR6049663Rhizomagastrodiae_C368-T01_good_10.960
SRR6049664Rhizomagastrodiae_C368-T10_good_10.320
SRR6049665Rhizomagastrodiae_C368-T10_good_10.320
SRP279888GastroGastrodia elata tuber 1.67
JuvenJuvenile tuber0.65
Mother_GastroMother tuber of Gastrodia elata 0.78
Mother_JuvenMother tuber of Juvenile 0.34