Detail information of GWHGAAEX002334/evm.TU.scaffold_12.69


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG06980Serine/threonine protein phosphatase
nrgi|672172180|ref|XP_008806175.1|0PREDICTED: probable protein phosphatase 2C 66 [Phoenix dactylifera]
Swissprottr|Q6ZKL8|P2C66_ORYSJ0Probable protein phosphatase 2C 66
trEMBLtr|J3MU64|J3MU64_ORYBR0Uncharacterized protein {ECO:0000313|EnsemblPlants:OB08G26450.1}
TAIRAT1G162200Protein phosphatase 2C family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000928351962864525-
Transcript Sequence

Network for GWHGAAEX002334

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00481.20PP2C1643867.90E-38
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.530
SRR2545915Juvenile tuber16.090
SRP108465SRR5643513five period of Gastrodia elata16.980
SRR5643514five period of Gastrodia elata17.850
SRR5643515five period of Gastrodia elata15.260
SRR5643524five period of Gastrodia elata17.680
SRR5643525five period of Gastrodia elata13.420
SRR5643528five period of Gastrodia elata15.490
SRR5643658five period of Gastrodia elata11.540
SRR5643659five period of Gastrodia elata17.050
SRR5643660five period of Gastrodia elata19.440
SRR5643661five period of Gastrodia elata16.860
SRR5643662five period of Gastrodia elata20.680
SRR5643663five period of Gastrodia elata18.750
SRR5643664five period of Gastrodia elata18.020
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.630
SRR6049655Rhizomagastrodiae_C368-T10_good_123.730
SRR6049656Rhizomagastrodiae_C368-T07_good_126.550
SRR6049657Rhizomagastrodiae_C368-T07_good_121.290
SRR6049658Rhizomagastrodiae_C368-T04_good_125.730
SRR6049659Rhizomagastrodiae_C368-T04_good_129.790
SRR6049660Rhizomagastrodiae_C368-T01_good_125.930
SRR6049661Rhizomagastrodiae_C368-T04_good_125.160
SRR6049662Rhizomagastrodiae_C368-T01_good_124.770
SRR6049663Rhizomagastrodiae_C368-T01_good_128.670
SRR6049664Rhizomagastrodiae_C368-T10_good_130.330
SRR6049665Rhizomagastrodiae_C368-T10_good_130.330
SRP279888GastroGastrodia elata tuber 23.33
JuvenJuvenile tuber22.41
Mother_GastroMother tuber of Gastrodia elata 12.41
Mother_JuvenMother tuber of Juvenile 10.67