Detail information of GWHGAAEX002343/evm.TU.scaffold_12.81


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00481.00E-112Transcription factor, Myb superfamily
nrgi|672189115|ref|XP_008813758.1|2.54E-137PREDICTED: transcription factor MYB12 [Phoenix dactylifera]
Swissprottr|P20025|MYB38_MAIZE1.00E-56Myb-related protein Zm38
trEMBLtr|M5WEW7|M5WEW7_PRUPE1.00E-130Uncharacterized protein {ECO:0000313|EMBL:EMJ07818.1}
TAIRAT5G561101.00E-112myb domain protein 103

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000937228113723814+
Transcript Sequence

Network for GWHGAAEX002343

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding14612.70E-17
PF00249.30Myb_DNA-binding681161.20E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.720
SRR2545915Juvenile tuber4.250
SRP108465SRR5643513five period of Gastrodia elata7.640
SRR5643514five period of Gastrodia elata13.270
SRR5643515five period of Gastrodia elata10.470
SRR5643524five period of Gastrodia elata14.740
SRR5643525five period of Gastrodia elata12.240
SRR5643528five period of Gastrodia elata9.390
SRR5643658five period of Gastrodia elata13.740
SRR5643659five period of Gastrodia elata0.980
SRR5643660five period of Gastrodia elata2.040
SRR5643661five period of Gastrodia elata0.590
SRR5643662five period of Gastrodia elata0.780
SRR5643663five period of Gastrodia elata0.450
SRR5643664five period of Gastrodia elata0.900
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.330
SRR6049655Rhizomagastrodiae_C368-T10_good_111.710
SRR6049656Rhizomagastrodiae_C368-T07_good_112.670
SRR6049657Rhizomagastrodiae_C368-T07_good_111.750
SRR6049658Rhizomagastrodiae_C368-T04_good_119.160
SRR6049659Rhizomagastrodiae_C368-T04_good_124.370
SRR6049660Rhizomagastrodiae_C368-T01_good_115.000
SRR6049661Rhizomagastrodiae_C368-T04_good_115.970
SRR6049662Rhizomagastrodiae_C368-T01_good_17.070
SRR6049663Rhizomagastrodiae_C368-T01_good_18.550
SRR6049664Rhizomagastrodiae_C368-T10_good_19.350
SRR6049665Rhizomagastrodiae_C368-T10_good_19.350
SRP279888GastroGastrodia elata tuber 2.04
JuvenJuvenile tuber5.18
Mother_GastroMother tuber of Gastrodia elata 10.74
Mother_JuvenMother tuber of Juvenile 6.19