Detail information of GWHGAAEX002349/evm.TU.scaffold_12.93


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34522.00E-5560S ribosomal protein L36
nrgi|695025252|ref|XP_009399872.1|5.33E-67PREDICTED: 60S ribosomal protein L36-2-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9M352|RL362_ARATH7.00E-5660S ribosomal protein L36-2
trEMBLtr|M0SWE2|M0SWE2_MUSAM2.00E-6760S ribosomal protein L36 {ECO:0000256|RuleBase:RU000665}
TAIRAT3G537402.00E-55Ribosomal protein L36e family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000943280314351055+
Transcript Sequence

Network for GWHGAAEX002349

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01158.17Ribosomal_L36e81015.90E-43
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02920RP-L36e, RPL36 Ribosome map03010

Gene Ontology

GO term OntologyName
GO:0006412Biological Processtranslation
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0005840Cellular Componentribosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms153.150
SRR2545915Juvenile tuber199.430
SRP108465SRR5643513five period of Gastrodia elata226.560
SRR5643514five period of Gastrodia elata271.920
SRR5643515five period of Gastrodia elata245.690
SRR5643524five period of Gastrodia elata279.830
SRR5643525five period of Gastrodia elata190.630
SRR5643528five period of Gastrodia elata221.910
SRR5643658five period of Gastrodia elata169.870
SRR5643659five period of Gastrodia elata237.010
SRR5643660five period of Gastrodia elata221.040
SRR5643661five period of Gastrodia elata248.850
SRR5643662five period of Gastrodia elata193.370
SRR5643663five period of Gastrodia elata225.710
SRR5643664five period of Gastrodia elata189.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1167.150
SRR6049655Rhizomagastrodiae_C368-T10_good_1131.340
SRR6049656Rhizomagastrodiae_C368-T07_good_1221.710
SRR6049657Rhizomagastrodiae_C368-T07_good_1180.430
SRR6049658Rhizomagastrodiae_C368-T04_good_1171.980
SRR6049659Rhizomagastrodiae_C368-T04_good_1137.640
SRR6049660Rhizomagastrodiae_C368-T01_good_1181.340
SRR6049661Rhizomagastrodiae_C368-T04_good_1172.050
SRR6049662Rhizomagastrodiae_C368-T01_good_1226.550
SRR6049663Rhizomagastrodiae_C368-T01_good_1212.440
SRR6049664Rhizomagastrodiae_C368-T10_good_1291.940
SRR6049665Rhizomagastrodiae_C368-T10_good_1291.940
SRP279888GastroGastrodia elata tuber 286.11
JuvenJuvenile tuber243.77
Mother_GastroMother tuber of Gastrodia elata 203.46
Mother_JuvenMother tuber of Juvenile 202.08