Detail information of GWHGAAEX002350/evm.TU.scaffold_12.98


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695063186|ref|XP_009420090.1|6.03E-96PREDICTED: dof zinc finger protein DOF5.1-like isoform X1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9M2U1|DOF36_ARATH1.00E-55Dof zinc finger protein DOF3.6
trEMBLtr|M0RF43|M0RF43_MUSAM1.00E-84Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P03660_001}
TAIRAT3G553703.00E-50OBF-binding protein 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000946810664682446-
Transcript Sequence

Network for GWHGAAEX002350

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02701.14zf-Dof621184.40E-33
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.690
SRR2545915Juvenile tuber1.900
SRP108465SRR5643513five period of Gastrodia elata2.540
SRR5643514five period of Gastrodia elata1.850
SRR5643515five period of Gastrodia elata1.090
SRR5643524five period of Gastrodia elata1.510
SRR5643525five period of Gastrodia elata4.190
SRR5643528five period of Gastrodia elata3.420
SRR5643658five period of Gastrodia elata2.530
SRR5643659five period of Gastrodia elata0.270
SRR5643660five period of Gastrodia elata0.410
SRR5643661five period of Gastrodia elata0.470
SRR5643662five period of Gastrodia elata0.810
SRR5643663five period of Gastrodia elata0.130
SRR5643664five period of Gastrodia elata0.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.030
SRR6049655Rhizomagastrodiae_C368-T10_good_13.790
SRR6049656Rhizomagastrodiae_C368-T07_good_14.180
SRR6049657Rhizomagastrodiae_C368-T07_good_15.840
SRR6049658Rhizomagastrodiae_C368-T04_good_17.880
SRR6049659Rhizomagastrodiae_C368-T04_good_17.800
SRR6049660Rhizomagastrodiae_C368-T01_good_15.000
SRR6049661Rhizomagastrodiae_C368-T04_good_17.090
SRR6049662Rhizomagastrodiae_C368-T01_good_15.490
SRR6049663Rhizomagastrodiae_C368-T01_good_15.150
SRR6049664Rhizomagastrodiae_C368-T10_good_15.840
SRR6049665Rhizomagastrodiae_C368-T10_good_15.840
SRP279888GastroGastrodia elata tuber 1.36
JuvenJuvenile tuber1.71
Mother_GastroMother tuber of Gastrodia elata 5.44
Mother_JuvenMother tuber of Juvenile 3.19