Detail information of GWHGAAEX002361/evm.TU.scaffold_12.118
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|357387736|ref|YP_004902575.1| | 4.00E-13 | putative serine/threonine protein kinase [Kitasatospora setae KM-6054] |
| KOG | KOG0671 | 0 | LAMMER dual specificity kinases |
| nr | gi|731399112|ref|XP_010653501.1| | 0 | PREDICTED: serine/threonine-protein kinase AFC1 isoform X1 [Vitis vinifera] |
| Swissprot | tr|P51566|AFC1_ARATH | 0 | Serine/threonine-protein kinase AFC1 |
| trEMBL | tr|D7TQF1|D7TQF1_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI32671.3} |
| TAIR | AT3G53570 | 0 | FUS3-complementing gene 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000009 | 5451112 | 5467144 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002361
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 34 | 354 | 2.60E-47 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_CLK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 34.900 |
| SRR2545915 | Juvenile tuber | 35.690 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 23.480 |
| SRR5643514 | five period of Gastrodia elata | 26.900 | |
| SRR5643515 | five period of Gastrodia elata | 28.060 | |
| SRR5643524 | five period of Gastrodia elata | 27.610 | |
| SRR5643525 | five period of Gastrodia elata | 43.870 | |
| SRR5643528 | five period of Gastrodia elata | 44.210 | |
| SRR5643658 | five period of Gastrodia elata | 38.610 | |
| SRR5643659 | five period of Gastrodia elata | 27.230 | |
| SRR5643660 | five period of Gastrodia elata | 32.780 | |
| SRR5643661 | five period of Gastrodia elata | 28.590 | |
| SRR5643662 | five period of Gastrodia elata | 31.300 | |
| SRR5643663 | five period of Gastrodia elata | 31.910 | |
| SRR5643664 | five period of Gastrodia elata | 26.500 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 28.020 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 23.930 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 27.370 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 25.600 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 27.310 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 29.230 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 27.840 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 26.880 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 23.320 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 28.300 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 27.860 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 27.860 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 51.78 |
| Juven | Juvenile tuber | 43.91 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 94.28 | |
| Mother_Juven | Mother tuber of Juvenile | 92.28 |