Detail information of GWHGAAEX002363/evm.TU.scaffold_12.120


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17442.00E-80Histone H2B
nrgi|672110380|ref|XP_008795023.1|6.82E-81PREDICTED: histone H2B.11-like [Phoenix dactylifera]
Swissprottr|O23629|H2B6_ARATH7.00E-81Histone H2B.6
trEMBLtr|V4N9A6|V4N9A6_EUTSA5.00E-79Histone H2B {ECO:0000256|RuleBase:RU000451}
TAIRAT3G459802.00E-80Histone superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000954797335480552+
Transcript Sequence

Network for GWHGAAEX002363

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00125.23Histone211353.00E-21
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046982Molecular Functionprotein heterodimerization activity
GO:0003677Molecular FunctionDNA binding
GO:0000786Cellular Componentnucleosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.430
SRR2545915Juvenile tuber40.930
SRP108465SRR5643513five period of Gastrodia elata56.720
SRR5643514five period of Gastrodia elata90.400
SRR5643515five period of Gastrodia elata62.740
SRR5643524five period of Gastrodia elata66.620
SRR5643525five period of Gastrodia elata132.550
SRR5643528five period of Gastrodia elata188.320
SRR5643658five period of Gastrodia elata68.320
SRR5643659five period of Gastrodia elata32.980
SRR5643660five period of Gastrodia elata21.910
SRR5643661five period of Gastrodia elata33.470
SRR5643662five period of Gastrodia elata21.400
SRR5643663five period of Gastrodia elata32.070
SRR5643664five period of Gastrodia elata27.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.300
SRR6049655Rhizomagastrodiae_C368-T10_good_1120.320
SRR6049656Rhizomagastrodiae_C368-T07_good_169.110
SRR6049657Rhizomagastrodiae_C368-T07_good_141.230
SRR6049658Rhizomagastrodiae_C368-T04_good_135.830
SRR6049659Rhizomagastrodiae_C368-T04_good_128.140
SRR6049660Rhizomagastrodiae_C368-T01_good_138.090
SRR6049661Rhizomagastrodiae_C368-T04_good_147.360
SRR6049662Rhizomagastrodiae_C368-T01_good_184.560
SRR6049663Rhizomagastrodiae_C368-T01_good_154.140
SRR6049664Rhizomagastrodiae_C368-T10_good_192.790
SRR6049665Rhizomagastrodiae_C368-T10_good_192.790
SRP279888GastroGastrodia elata tuber 20.46
JuvenJuvenile tuber14.90
Mother_GastroMother tuber of Gastrodia elata 333.50
Mother_JuvenMother tuber of Juvenile 44.29