Detail information of GWHGAAEX002364/evm.TU.scaffold_12.121


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17219.00E-20FOG: Zn-finger
nrgi|672114311|ref|XP_008776407.1|7.76E-24PREDICTED: zinc finger protein ZAT11-like [Phoenix dactylifera]
Swissprottr|Q9SLD4|ZAT11_ARATH3.00E-20Zinc finger protein ZAT11
trEMBLtr|Q2HU63|Q2HU63_MEDTR3.00E-23Zinc finger, C2H2-type {ECO:0000313|EMBL:ABD32282.1}
TAIRAT2G374309.00E-20C2H2 and C2HC zinc fingers superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000954891235490444+
Transcript Sequence

Network for GWHGAAEX002364

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module13

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.5zf-C2H2_612344.70E-10
PF13912.5zf-C2H2_650744.50E-08
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.810
SRR2545915Juvenile tuber7.290
SRP108465SRR5643513five period of Gastrodia elata25.600
SRR5643514five period of Gastrodia elata8.090
SRR5643515five period of Gastrodia elata65.520
SRR5643524five period of Gastrodia elata8.540
SRR5643525five period of Gastrodia elata189.500
SRR5643528five period of Gastrodia elata80.180
SRR5643658five period of Gastrodia elata77.380
SRR5643659five period of Gastrodia elata37.880
SRR5643660five period of Gastrodia elata4.250
SRR5643661five period of Gastrodia elata6.520
SRR5643662five period of Gastrodia elata31.820
SRR5643663five period of Gastrodia elata16.490
SRR5643664five period of Gastrodia elata189.580
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.600
SRR6049655Rhizomagastrodiae_C368-T10_good_120.750
SRR6049656Rhizomagastrodiae_C368-T07_good_117.400
SRR6049657Rhizomagastrodiae_C368-T07_good_124.310
SRR6049658Rhizomagastrodiae_C368-T04_good_127.740
SRR6049659Rhizomagastrodiae_C368-T04_good_123.270
SRR6049660Rhizomagastrodiae_C368-T01_good_184.190
SRR6049661Rhizomagastrodiae_C368-T04_good_137.450
SRR6049662Rhizomagastrodiae_C368-T01_good_113.520
SRR6049663Rhizomagastrodiae_C368-T01_good_147.330
SRR6049664Rhizomagastrodiae_C368-T10_good_123.090
SRR6049665Rhizomagastrodiae_C368-T10_good_123.090
SRP279888GastroGastrodia elata tuber 8.69
JuvenJuvenile tuber0.80
Mother_GastroMother tuber of Gastrodia elata 74.76
Mother_JuvenMother tuber of Juvenile 27.91