Detail information of GWHGAAEX002377/evm.TU.scaffold_12.140


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG21166.00E-116Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism
nrgi|719991835|ref|XP_010253377.1|1.43E-127PREDICTED: phosphatidate phosphatase PAH1-like isoform X1 [Nelumbo nucifera]
Swissprottr|Q9SF47|PAH1_ARATH2.00E-116Phosphatidate phosphatase PAH1
trEMBLtr|A0A068UEQ9|A0A068UEQ9_COFCA6.00E-125Coffea canephora
TAIRAT3G095606.00E-116Lipin family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000963220476368569+
Transcript Sequence

Network for GWHGAAEX002377

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08235.12LNS2612288.60E-68
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15728LPIN Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Glycerolipid metabolismmap00561
Glycerophospholipid metabolismmap00564

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.090
SRR2545915Juvenile tuber20.550
SRP108465SRR5643513five period of Gastrodia elata35.560
SRR5643514five period of Gastrodia elata31.040
SRR5643515five period of Gastrodia elata23.560
SRR5643524five period of Gastrodia elata36.890
SRR5643525five period of Gastrodia elata34.230
SRR5643528five period of Gastrodia elata30.510
SRR5643658five period of Gastrodia elata27.560
SRR5643659five period of Gastrodia elata22.990
SRR5643660five period of Gastrodia elata23.450
SRR5643661five period of Gastrodia elata23.090
SRR5643662five period of Gastrodia elata17.910
SRR5643663five period of Gastrodia elata25.000
SRR5643664five period of Gastrodia elata21.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.740
SRR6049655Rhizomagastrodiae_C368-T10_good_132.540
SRR6049656Rhizomagastrodiae_C368-T07_good_119.890
SRR6049657Rhizomagastrodiae_C368-T07_good_119.890
SRR6049658Rhizomagastrodiae_C368-T04_good_117.850
SRR6049659Rhizomagastrodiae_C368-T04_good_113.970
SRR6049660Rhizomagastrodiae_C368-T01_good_115.820
SRR6049661Rhizomagastrodiae_C368-T04_good_113.250
SRR6049662Rhizomagastrodiae_C368-T01_good_115.250
SRR6049663Rhizomagastrodiae_C368-T01_good_114.460
SRR6049664Rhizomagastrodiae_C368-T10_good_123.480
SRR6049665Rhizomagastrodiae_C368-T10_good_123.480
SRP279888GastroGastrodia elata tuber 17.21
JuvenJuvenile tuber31.53
Mother_GastroMother tuber of Gastrodia elata 30.84
Mother_JuvenMother tuber of Juvenile 40.19