Detail information of GWHGAAEX002382/evm.TU.scaffold_12.150
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|379728659|ref|YP_005320855.1| | 8.00E-131 | sulfate transporter [Saprospira grandis str. Lewin] |
| KOG | KOG0236 | 0 | Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) |
| nr | gi|743787424|ref|XP_010922414.1| | 0 | PREDICTED: sulfate transporter 4.1, chloroplastic-like [Elaeis guineensis] |
| Swissprot | tr|Q9FY46|SUT41_ARATH | 0 | Sulfate transporter 4.1, chloroplastic (Precursor) |
| trEMBL | tr|M0S8F8|M0S8F8_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P16170_001} |
| TAIR | AT5G13550 | 0 | sulfate transporter 4.1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000009 | 6746664 | 6812982 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002382
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00916.19 | Sulfate_transp | 78 | 451 | 2.10E-120 |
| PF01740.20 | STAS | 502 | 621 | 8.60E-32 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0008272 | Biological Process | sulfate transport |
| GO:0015116 | Molecular Function | sulfate transmembrane transporter activity |
| GO:0008271 | Molecular Function | secondary active sulfate transmembrane transporter activity |
| GO:0016021 | Cellular Component | integral component of membrane |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 34.140 |
| SRR2545915 | Juvenile tuber | 35.380 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 17.570 |
| SRR5643514 | five period of Gastrodia elata | 19.380 | |
| SRR5643515 | five period of Gastrodia elata | 16.410 | |
| SRR5643524 | five period of Gastrodia elata | 15.900 | |
| SRR5643525 | five period of Gastrodia elata | 21.360 | |
| SRR5643528 | five period of Gastrodia elata | 17.330 | |
| SRR5643658 | five period of Gastrodia elata | 23.360 | |
| SRR5643659 | five period of Gastrodia elata | 16.210 | |
| SRR5643660 | five period of Gastrodia elata | 15.560 | |
| SRR5643661 | five period of Gastrodia elata | 14.540 | |
| SRR5643662 | five period of Gastrodia elata | 13.670 | |
| SRR5643663 | five period of Gastrodia elata | 14.270 | |
| SRR5643664 | five period of Gastrodia elata | 14.370 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 26.030 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 30.050 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 25.510 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 29.880 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 30.010 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 34.570 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 29.970 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 29.500 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 23.690 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 26.790 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 22.760 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 22.760 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 15.15 |
| Juven | Juvenile tuber | 21.27 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 22.63 | |
| Mother_Juven | Mother tuber of Juvenile | 26.05 |