Detail information of GWHGAAEX002392/evm.TU.scaffold_12.168


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695062342|ref|XP_009419635.1|3.21E-83PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LMK2|LSH6_ARATH2.00E-78Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6
trEMBLtr|A0A078JW20|A0A078JW20_BRANA5.00E-79BnaCnng65050D protein {ECO:0000313|EMBL:CDY69731.1}
TAIRAT1G070907.00E-78Protein of unknown function (DUF640)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000975610557566482-
Transcript Sequence

Network for GWHGAAEX002392

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04852.11DUF64081243.00E-63
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.920
SRR2545915Juvenile tuber6.760
SRP108465SRR5643513five period of Gastrodia elata9.240
SRR5643514five period of Gastrodia elata16.860
SRR5643515five period of Gastrodia elata9.520
SRR5643524five period of Gastrodia elata17.070
SRR5643525five period of Gastrodia elata9.750
SRR5643528five period of Gastrodia elata7.240
SRR5643658five period of Gastrodia elata20.540
SRR5643659five period of Gastrodia elata10.820
SRR5643660five period of Gastrodia elata7.710
SRR5643661five period of Gastrodia elata10.020
SRR5643662five period of Gastrodia elata11.920
SRR5643663five period of Gastrodia elata9.560
SRR5643664five period of Gastrodia elata22.490
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.290
SRR6049655Rhizomagastrodiae_C368-T10_good_17.890
SRR6049656Rhizomagastrodiae_C368-T07_good_16.330
SRR6049657Rhizomagastrodiae_C368-T07_good_18.160
SRR6049658Rhizomagastrodiae_C368-T04_good_12.730
SRR6049659Rhizomagastrodiae_C368-T04_good_11.740
SRR6049660Rhizomagastrodiae_C368-T01_good_14.230
SRR6049661Rhizomagastrodiae_C368-T04_good_12.340
SRR6049662Rhizomagastrodiae_C368-T01_good_14.520
SRR6049663Rhizomagastrodiae_C368-T01_good_12.160
SRR6049664Rhizomagastrodiae_C368-T10_good_15.130
SRR6049665Rhizomagastrodiae_C368-T10_good_15.130
SRP279888GastroGastrodia elata tuber 19.40
JuvenJuvenile tuber113.00
Mother_GastroMother tuber of Gastrodia elata 5.06
Mother_JuvenMother tuber of Juvenile 27.43